Detail information of GWHGAAEX008277/evm.TU.scaffold_213.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434394308|ref|YP_007129255.1|3.00E-24Kelch repeat type 1-containing protein [Gloeocapsa sp. PCC 7428]
KOGKOG10720FOG: Kelch repeat
nrgi|672163989|ref|XP_008801858.1|0PREDICTED: kelch repeat-containing protein At3g27220-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9LK31|Y3272_ARATH0Kelch repeat-containing protein At3g27220
trEMBLtr|M0TAY6|M0TAY6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P28410_001}
TAIRAT1G51540_20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000216220834240709+
Transcript Sequence

Network for GWHGAAEX008277

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13418.5Kelch_43093482.90E-06
PF01344.24Kelch_13614077.00E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.750
SRR2545915Juvenile tuber20.790
SRP108465SRR5643513five period of Gastrodia elata15.650
SRR5643514five period of Gastrodia elata13.350
SRR5643515five period of Gastrodia elata14.750
SRR5643524five period of Gastrodia elata14.080
SRR5643525five period of Gastrodia elata14.950
SRR5643528five period of Gastrodia elata11.860
SRR5643658five period of Gastrodia elata13.390
SRR5643659five period of Gastrodia elata15.300
SRR5643660five period of Gastrodia elata15.400
SRR5643661five period of Gastrodia elata14.350
SRR5643662five period of Gastrodia elata13.800
SRR5643663five period of Gastrodia elata13.870
SRR5643664five period of Gastrodia elata13.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.310
SRR6049655Rhizomagastrodiae_C368-T10_good_110.290
SRR6049656Rhizomagastrodiae_C368-T07_good_118.430
SRR6049657Rhizomagastrodiae_C368-T07_good_124.170
SRR6049658Rhizomagastrodiae_C368-T04_good_129.990
SRR6049659Rhizomagastrodiae_C368-T04_good_130.240
SRR6049660Rhizomagastrodiae_C368-T01_good_119.210
SRR6049661Rhizomagastrodiae_C368-T04_good_123.900
SRR6049662Rhizomagastrodiae_C368-T01_good_116.800
SRR6049663Rhizomagastrodiae_C368-T01_good_118.710
SRR6049664Rhizomagastrodiae_C368-T10_good_114.700
SRR6049665Rhizomagastrodiae_C368-T10_good_114.700
SRP279888GastroGastrodia elata tuber 17.94
JuvenJuvenile tuber12.27
Mother_GastroMother tuber of Gastrodia elata 16.31
Mother_JuvenMother tuber of Juvenile 14.51