Detail information of GWHGAAEX008286/evm.TU.scaffold_213.20
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|113474808|ref|YP_720869.1| | 6.00E-62 | xanthine/uracil/vitamin C permease [Trichodesmium erythraeum IMS101] |
| nr | gi|695032202|ref|XP_009403640.1| | 0 | PREDICTED: adenine/guanine permease AZG2-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q84MA8|AZG2_ARATH | 6.00E-149 | Adenine/guanine permease AZG2 |
| trEMBL | tr|W5ETF8|W5ETF8_WHEAT | 3.00E-178 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_4DS_E07CA6058.1} |
| TAIR | AT5G50300 | 2.00E-148 | Xanthine/uracil permease family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000216 | 503783 | 505287 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008286
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00860.19 | Xan_ur_permease | 279 | 427 | 3.10E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.110 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.520 |
| SRR5643514 | five period of Gastrodia elata | 0.780 | |
| SRR5643515 | five period of Gastrodia elata | 0.600 | |
| SRR5643524 | five period of Gastrodia elata | 0.530 | |
| SRR5643525 | five period of Gastrodia elata | 0.110 | |
| SRR5643528 | five period of Gastrodia elata | 0.410 | |
| SRR5643658 | five period of Gastrodia elata | 0.260 | |
| SRR5643659 | five period of Gastrodia elata | 0.140 | |
| SRR5643660 | five period of Gastrodia elata | 0.160 | |
| SRR5643661 | five period of Gastrodia elata | 0.050 | |
| SRR5643662 | five period of Gastrodia elata | 0.260 | |
| SRR5643663 | five period of Gastrodia elata | 0.040 | |
| SRR5643664 | five period of Gastrodia elata | 0.190 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.250 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.290 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.210 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.110 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.100 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.060 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.040 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.050 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.30 |
| Juven | Juvenile tuber | 0.26 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.71 | |
| Mother_Juven | Mother tuber of Juvenile | 0.84 |