Detail information of GWHGAAEX008291/evm.TU.scaffold_213.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|158335248|ref|YP_001516420.1|06-phosphogluconate dehydrogenase [Acaryochloris marina MBIC11017]
KOGKOG265306-phosphogluconate dehydrogenase
nrgi|695003556|ref|XP_009386035.1|0PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SH69|6PGD1_ARATH06-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic
trEMBLtr|F6HUQ8|F6HUQ8_VITVI06-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}
TAIRAT1G6419006-phosphogluconate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000216759958761763+
Transcript Sequence

Network for GWHGAAEX008291

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03446.14NAD_binding_281741.20E-45
PF00393.186PGD1844766.00E-126
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00033PGD, gnd, gntZ Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Pentose phosphate pathwaymap00030
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006098Biological Processpentose-phosphate shunt
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0050661Molecular FunctionNADP binding
GO:0004616Molecular Functionphosphogluconate dehydrogenase (decarboxylating) activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.270
SRR2545915Juvenile tuber48.150
SRP108465SRR5643513five period of Gastrodia elata106.560
SRR5643514five period of Gastrodia elata104.320
SRR5643515five period of Gastrodia elata86.730
SRR5643524five period of Gastrodia elata100.310
SRR5643525five period of Gastrodia elata79.460
SRR5643528five period of Gastrodia elata96.430
SRR5643658five period of Gastrodia elata80.680
SRR5643659five period of Gastrodia elata75.420
SRR5643660five period of Gastrodia elata77.690
SRR5643661five period of Gastrodia elata79.790
SRR5643662five period of Gastrodia elata70.520
SRR5643663five period of Gastrodia elata69.360
SRR5643664five period of Gastrodia elata64.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1102.650
SRR6049655Rhizomagastrodiae_C368-T10_good_1114.620
SRR6049656Rhizomagastrodiae_C368-T07_good_1123.580
SRR6049657Rhizomagastrodiae_C368-T07_good_1104.170
SRR6049658Rhizomagastrodiae_C368-T04_good_193.280
SRR6049659Rhizomagastrodiae_C368-T04_good_1102.890
SRR6049660Rhizomagastrodiae_C368-T01_good_194.630
SRR6049661Rhizomagastrodiae_C368-T04_good_199.970
SRR6049662Rhizomagastrodiae_C368-T01_good_1132.140
SRR6049663Rhizomagastrodiae_C368-T01_good_1117.320
SRR6049664Rhizomagastrodiae_C368-T10_good_1149.160
SRR6049665Rhizomagastrodiae_C368-T10_good_1149.160
SRP279888GastroGastrodia elata tuber 55.78
JuvenJuvenile tuber108.31
Mother_GastroMother tuber of Gastrodia elata 50.63
Mother_JuvenMother tuber of Juvenile 76.59