Detail information of GWHGAAEX008303/evm.TU.scaffold_214.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|328950184|ref|YP_004367519.1|8.00E-161glycerol-3-phosphate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
KOGKOG00420Glycerol-3-phosphate dehydrogenase
nrgi|743861896|ref|XP_010943403.1|0PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial [Elaeis guineensis]
Swissprottr|Q9SS48|SDP6_ARATH0Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial (Precursor)
trEMBLtr|M0RSY2|M0RSY2_MUSAM0Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}
TAIRAT3G103700FAD-dependent oxidoreductase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000217108233155241-
Transcript Sequence

Network for GWHGAAEX008303

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01266.23DAO754435.70E-54
PF16901.4DAO_C4656002.00E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00111glpA, glpD Biosynthesis of secondary metabolites map01110
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006072Biological Processglycerol-3-phosphate metabolic process
GO:0016491Molecular Functionoxidoreductase activity
GO:0004368Molecular Functionglycerol-3-phosphate dehydrogenase activity
GO:0009331Cellular Componentglycerol-3-phosphate dehydrogenase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.610
SRR2545915Juvenile tuber13.650
SRP108465SRR5643513five period of Gastrodia elata12.290
SRR5643514five period of Gastrodia elata15.450
SRR5643515five period of Gastrodia elata13.450
SRR5643524five period of Gastrodia elata13.760
SRR5643525five period of Gastrodia elata23.030
SRR5643528five period of Gastrodia elata25.620
SRR5643658five period of Gastrodia elata19.920
SRR5643659five period of Gastrodia elata6.770
SRR5643660five period of Gastrodia elata7.790
SRR5643661five period of Gastrodia elata7.910
SRR5643662five period of Gastrodia elata6.350
SRR5643663five period of Gastrodia elata6.640
SRR5643664five period of Gastrodia elata7.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.510
SRR6049655Rhizomagastrodiae_C368-T10_good_18.100
SRR6049656Rhizomagastrodiae_C368-T07_good_112.930
SRR6049657Rhizomagastrodiae_C368-T07_good_110.370
SRR6049658Rhizomagastrodiae_C368-T04_good_113.940
SRR6049659Rhizomagastrodiae_C368-T04_good_114.140
SRR6049660Rhizomagastrodiae_C368-T01_good_112.920
SRR6049661Rhizomagastrodiae_C368-T04_good_111.360
SRR6049662Rhizomagastrodiae_C368-T01_good_112.810
SRR6049663Rhizomagastrodiae_C368-T01_good_112.320
SRR6049664Rhizomagastrodiae_C368-T10_good_113.490
SRR6049665Rhizomagastrodiae_C368-T10_good_113.490
SRP279888GastroGastrodia elata tuber 10.10
JuvenJuvenile tuber10.48
Mother_GastroMother tuber of Gastrodia elata 34.77
Mother_JuvenMother tuber of Juvenile 32.70