Gene detail

Detail information of GWHGAAEX008313/evm.TU.scaffold_214.18

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|194334297\|ref\|YP_002016157.1\|	6.00E-08	glycoside hydrolase 15-like protein [Prosthecochloris aestuarii DSM 271]
nr	gi\|672160528\|ref\|XP_008800047.1\|	0	PREDICTED: uncharacterized protein LOC103714542 [Phoenix dactylifera]
trEMBL	tr\|A0A061GYR9\|A0A061GYR9_THECC	5.00E-165	Uncharacterized protein {ECO:0000313\|EMBL:EOY34422.1}
TAIR	AT5G60720	4.00E-108	Protein of unknown function, DUF547

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000217	586450	603006	+

Transcript Sequence
>GWHTAAEX008313 ATTTGGCCTATGCCCTCAAATTTTTTAAATAAAAATAAAAATAAATAAATTTTTATATGCTTATCACCTGAATTTTCATAGAGTATTATACCGCACAAGCTTTCATTTTTACAAATTAAAACCTGTTTCACTTTGGAGTCTATTCACAGTCGCAGAACCTCAAAAACTTGCAAAGAGAAGAACGAAAATTTCTATCCGCAATATAAACAAAGCTGAGATTCAAAGCGAAGGAAGGCTGCAATGACTGGTGACCCTCCACCGAGCTCCTCGTCAGCTACGCGACCTCCTGCCTTTCAAAAAATGACTTGTTCTTCTTCGATGGCAGCCTCTCACCTTCCCTCACTTTGCCTCAAAGACTCCAGATCCGCCTCCATTGACAGATATCTTCCCTTTTATTGCACTTCTGCACCCCCTTCCCCTCTCCGCCATGTGCACCATCTCTATGAGCGAAAATGAAGACTGGAAATGGGCAGCGGATAAGGCAAGAACTTGAAGAAGAGGTAGCAATGCTTCAAAAGATGCTTAGTGATGAGAAAAGAGTGCATGAAATTTTGCAACGTGCATTGCTTCCAAATGGCATTCCATCAACGGTGCATATTCCGAATTTTCTACCAAAAATGGCAAAGGAGCTCTTAGCAGAACTTTTCATGCTCGAAGAAGAGATTGCTCGGCTAGAAAGAGAAATAAGTAAAGGTCAGCAGAGTTTGATTGCATCTTGCAGTCAGTCATCACCATTTCAAACAACAAGAAATACTAATGTTTTTGAAGATAAGATGGCGTTTGGAAGTAAGCCCATGTTTTTCATAAATCAAGCAATGAAAGGAGTCTGCTCTAGACACAGCTTTTCTACCAGGGAAGGTTCATTAAAAACAGCCAGGAGAATGGAAAGGCAAATAATGGCAACAAACAATCAAGAGAGAATTCCAAGGAAAAGTGAAATAATGGAAATTCTCCCCTCACCAAAGAAGCCCCCAAAGGCTCCATCTCCTCGACTATCAGATCATAAGATTGATACTTCACAAAAATTGCTGCTTCATGAACCCACTTTGATTACAAGCCCATTGGACAATAATGATCAGCATTGGCAGCCAAATAAGTTATCGGAGAAAATTTTGAAATGTCTTATATGCATGTTCTTGAGGCTGATGAGAACATCTCGCTCAATGGAGCTCGAAAAGTCAAGCTACTCGATTTCAAGAACAAGCTTTAGAGTAGACAACAGTTTGGCTTTAAACTCAACCCTCAACATTCAGAGAACGGCATCTCAGAAGGATCCATATGGAATATTTCAAATGGAGGATTCCTTGGCAAGAGATATAGGTCCTTACAAAAACTTTGTTAGATTCACATCAAGTTCTCTGGAGCTTAGAGGAATCTCTATTTGTCTTCCCCTACTAAACATTTTAAGGAATCTGATTAGCAATTTGCATAAGGTGGACCTGAAATCATTGAATTACCATCAGAAATTGGCCTTCTGGATCAATATTCATAATATATGTATCATGCATGGTTTCCTGGAGCATGGCTTGCCTTCTGATCCTGACAAAATTCTCGGCTTAAGAAATAAGGCTGTGCTTAACATAGGAGGCATTAAGTTGAATGCCTTGGCGATTGAGCATTTTATTCTAAGGCACCCTTCAGTTAAAAATGAATTTTCTTTTCAGTCTGTCTGGATGAGTGATAAAGAAGGCAAAGAAGAAGAAGAGGCAATCCGAGTTATGTACGGTCTGGATCAGGCAGAACCGAATGTTCAATTTGCTTTATGTTTTGGAAACAGATCTTCTCCTTCCGTAAAGATTTACACATCAGATGGTGTTTCTGCTGAGCTAGAGAAATCGAAACTTGAGTACTTACAAGCTTCAATTGTTGTGACAACATTAGGAAGGATAATGATTCCAAAGCTCTTATATTCGATCATGTTTGATATTGCTGAGGATTTGGACTCATTGATAGAGTGGATTTGCAGTCAACTGCCCACATCTGGTACACTAAGGAAATCCATTACCGAGTGTGTAATAGGACAGGATTATAGAAAGATATCTGATATTGTGGATATATTGCCTTTTGACTTTGAGTTCCAATATTTATTATTGCCTATGTAAAATTTCAATTTTTTCCCCCTATTCTCATCATTTACTTTTGGTGAGAATGAACAATGAAACTGTTGAATTAATAAATATAACCAAAGCATTTTTTTTACTGAAAAAAAAGAGGGTTTGTTTGGATTGCTGACAATTTGGTTTTATGCTACCTTGTAATAATATAATGAGATGATAGATACCTGGATTAGTGCTATGATAT

Network for GWHGAAEX008313

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14389.5	Lzipper-MIP1	8	80	3.80E-18
PF04784.13	DUF547	331	467	9.90E-33

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.970
SRP064423	SRR2545915	Juvenile tuber	3.990
SRP108465	SRR5643513	five period of Gastrodia elata	8.930
	SRR5643514	five period of Gastrodia elata	4.750
	SRR5643515	five period of Gastrodia elata	5.310
	SRR5643524	five period of Gastrodia elata	6.100
	SRR5643525	five period of Gastrodia elata	13.840
	SRR5643528	five period of Gastrodia elata	16.400
	SRR5643658	five period of Gastrodia elata	53.550
	SRR5643659	five period of Gastrodia elata	4.000
	SRR5643660	five period of Gastrodia elata	3.120
	SRR5643661	five period of Gastrodia elata	3.640
	SRR5643662	five period of Gastrodia elata	3.620
	SRR5643663	five period of Gastrodia elata	4.390
	SRR5643664	five period of Gastrodia elata	3.260
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.100
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.040
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.940
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.960
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.090
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.650
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.640
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.640
SRP279888	Gastro	Gastrodia elata tuber	4.85
	Juven	Juvenile tuber	4.80
	Mother_Gastro	Mother tuber of Gastrodia elata	6.24
	Mother_Juven	Mother tuber of Juvenile	5.13