Gene detail

Detail information of GWHGAAEX008314/evm.TU.scaffold_214.19

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2246	Galactosyltransferases
nr	gi\|743829430\|ref\|XP_010934149.1\|	PREDICTED: uncharacterized protein LOC105054351 [Elaeis guineensis]
trEMBL	tr\|M0RP30\|M0RP30_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P03500_001}
TAIR	AT1G33250	Protein of unknown function (DUF604)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000217	608106	620780	+

Transcript Sequence
>GWHTAAEX008314 CCCCACGTTTTGCTGCTATTGATCCCACGCACCTTTCGCCAGTAACCCCCTGAAGCTCTGCATCCGTTCATACCTTCGTCGATTTTCTAAAACCCGTTCGTTTAAACGAAGGGGAGAAGATGAGGAAAAGTAGGTCTACCTCTTCAGATTTCAAAAACCTTCCTTCATCTTCCTCAATCCGTCACCTCCGAGAATCCGCCTCATCCACCCTGCGCCTTCGGCGAAGAAATGAGACTTGCCGCCGACAATGACGGCGGCAATGAAGACAACGACGAAGCCGATCCTTCCTACAGCATCTCCCCGCCCTTCCCGCCGCTTCTCCAATCGGCATCGCCGCCATGGCCGCACCGTAGCCTCGGCCGCAGCCTCCCTCCTCTCCCTCTTCCTCGCCACTACGGCTTGGCTCTCACTCGTCTTCGACCCCAGCCACCGCTTTGCTCTTCAGCACTTGCGCGCTTGGGATTCATCAACCTCTCATCATCATCATCATCAGCTTCATCCGCAGTCCCCTTTCCGCCCTCCTCGCATGGACCCTCCTTCCCCTCTCTCCTTAAACCACATCATCTTTGGCATCGCCGGATCCGCCAGCCTCTGGACTCGCAGGAAAGAGTTCATTCGCCTGTGGTGGCGGCCTTGCGTGATGCGAGGCCACGTTTGGCTTGACGACCGCGTGCATCAGTCGCAGAACGCCTCGGCTACCCTCCCGCCCGTCAGTGTCTCAGAGGACATATCCCGGTTTCGATACACAAATCCCACCGGCCATCCCTCCGGCCTGCGCATTTCCCGGATTGTGTCCGAAACCTTCCGTCTCGGCCATCGTGACGCTCGCTGGTTCATGCTCTGCGACGATGATACCATTGTGAGCCCTGATAACCTTGTTGCCGTGCTCTCCAAATACGATTGGAGGGAAATGGTTTACGTTGGAGGGCCGTCGGAGAGCCACTCGGCTAACACATACTTTAGCCATGCGATGGCTTTTGGGGGCGGGGGGATCGCGATAAGCTATCCTCTTGCTCAGGCGCTTTCTGGGATGCAGGATGATTGCCTCGAGAGGTATCCCAAGCTGTATGGTAGTGATGACCGCCTTCATGCTTGTATCTCCGAGCTCGGTGTTCCTCTAAGCCGTGAGTACGGTTTCCACCAGTGGGATATTAGGGGAAATGCGCATGGCATTTTGGCTGCTCACCCTGTTGCTCCATTCGTATCCATACACCATGTTGAAGCCGTGGATCCACTTTACCCTGGCTTAAACCATCTGGAGAGCTTGAAACTATTCACCTCAGCGTTACAGGTGAATCCTAGAAGTTTTTTGCAACGCGCCATTTGTTATGACAGAGAAGAGAGGATAACATTTGCTGTTTCACTGGGATATGTTGTACAAGTGTTCCCAAACATTGTTCTTCCAAGAGAGCTGGAGCCCTCTGAGGTGACTTACACTGCATGGAATAAAAATGGCAACCGGCTTGAGTTTGATTTTGACACCAAGGATTCCTATAGATCCGTGTGTAAAAAGCCAATTAAGTTTTTTCTGAGAAATGTTTTTGAAGATGGAAGTGTCTCTGTCAGTACATACCTGCGGTTCAAACATGGTGATCTGAAAAGAAAAGTTTTTTGCTTTCCTCAATCTCCCCCTCTGCCTTATGTGAATGAAATTCAGATATTGGGGAGTCCTCTGAGTGACAACTGGCATTTGGTTCCTAGACGTTTGTGTTGCCAAGTTGATAAAAAGGTTAACAGAACTCTGGGGTTAAATGTCAAGCAGTGCGAAAGCAGTGAACTTGGATCAGTTTCTGATTCTCTGTTACCCTAAAGGGAATCTTGGTTTTCAATTTTAGGCTGTGGTGCAGTGAGATGGCGAGCTCTATCATTTCTTTTACTGGCTTTTGACTGTGGCTATTTTGAAGACAGTGAAAGCCTGAGGTAGCTTCTACACGTGCACGCTAAATGCACTCCATTAATTAGGTGAAGTGTATAATTCTTTGCCTTCAAATTTTACATGGTAGGCCTTTTGTCATAATAAGAACAATAATTTTTGATTCGAATCTCAAGATTTGTAGGGTGCTTTTCCGCTATATGAATAGATCTCTTTCATGCTTTCAGTTGCCTTAAAAATGTATCATCTTTCTCTTTTTATGTATGCCATAATCTGTTACTGTTTTACTGGACATTTGCTACGGTTCTACATGTATCATAACAATATGTTCTTTTCATTCCATTTCCTATATTTATTCTTTATTCTGGTTATAGATCCTTGTCTTTTGGCAGATGAAATAATCTTTAACATATGCAGGGCATGCTCAATATCTTTGTGCATACTCTGAGTTTATAAAGTCAAGTATGGCCTTCATTATGTTTACTTCAAGAATAAATCAGATTAGGTAGAACTTTGAAAGGTGCTCTATGCGAGGCTGCCAACATGCAAAGCGCAATGCAACGCGCAAAGGAGCTTGGAGAACAAAAGCCTACGCATTTCGGTTGTCCAAGGGCACAAAAGAGTTGTTTCATACACTAGAAGAAGAAATGTATAGCTTGCGAACTTCAGCAAAACAATACTCATTATTAAGTAACCAATGTTTTTATCTCAATTATGATTCAGAAATTTGGTGAGGTTGGCTTTATTGAACACTATAGATAAAGTATGTCTTCTTTATAATTCATCTTTTAGGAATCGTGTAGATAAAGAAGACAAATGAATTTTCTTTGGGGTTAGTTGTATATTGTAGAGTTGGCCCTTCTTGTATTGGAACATGTAACCTTCTGTTCATGTGGAGAAAAGTTTTACATGATCTTTTGTGGGATGCTGGAAATGACTATTAGCTTAATTAATCACGAGCAGCCTTACATTTAAAATGGGCATCTTGTTTTTTGCTTTTTGCAGATGGTGTAGTCTTGATAGGTGAGATTTCTCTTTTGGTAAACAAGTAATTAAACTTTTAACTCGTAGGTAGCTTATGATAATTGAATATAGATCAAATCTTTGATGTTTAGCCTGTGGTCTTTTTAAATTAGTGAACGTGAAGCCAGTAATCAACAAAATATTTTATTGGAAAAGTTAATAAGTGTGATAGTGTTGTGTATGAGGAGAATGAGTGCTTCAACCGAAGGTAAATTGGGTTGCGGAGGCTTAACTGGGCTGACACATCCAGGCACTCGTGCTACCACTGAGCCTGAAGAGTGGCACTTAGACACGCCCAAGCGCTAGGCGGGGTGCGTGAACAATGCTCAGGCACCTGGAGGAATGCTTATGCACTTCCTCAGAAAATAGGAGCTGACAAAATGGCAGCATAGGCGGATTGGTGCGGGCTCAGCTGTGCATGCGCTGACAGATTGGTCGTGGAAAAGACTTGGCAAGCCCAGGCAGATGGATATGCTCCTATATGTGTGTGAACATGTAGAACGAATGTGGAACAACGTGATCCCACGTGCAGCAGATGTAACTGCCAGTCGCCCAGGTGCGCTTGGGAAATATGCCTGGGCGGCTGGCATTGCAGTCACAATCGGTTGAAGATCTTCTTAGCTTGTGGTCTTCAAAGAAGATCTTCTTAGCTTGTGGCTTCAAAGAAGGAGAGTAGCCATAATTTGAAGATCTTCTTAGCTTTGGTTGAGCACAATGCAAGATCTTGGTGCAAGGTTTGTGGAGATTTTTCTTCCATGCAACATTTGGCTGTAGGTGTTGTAAGCTTTTTCAGCATTATCAGTTATGATTTTTAAAGTTTGTACTTTGAGTTTTTTTTCCTTGAAGAAGATTTTGTCATGGTATTGTCAATCGTGGAAAGCATTCAAGGGTGATGAAGTCATATTGAGCGATTGTGAACAAATAATCCCCATTTATGAATGATT

Network for GWHGAAEX008314

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04646.11	DUF604	235	489	5.80E-97

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT31

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.490
SRP064423	SRR2545915	Juvenile tuber	1.710
SRP108465	SRR5643513	five period of Gastrodia elata	5.050
	SRR5643514	five period of Gastrodia elata	4.680
	SRR5643515	five period of Gastrodia elata	3.880
	SRR5643524	five period of Gastrodia elata	5.560
	SRR5643525	five period of Gastrodia elata	3.460
	SRR5643528	five period of Gastrodia elata	3.220
	SRR5643658	five period of Gastrodia elata	2.660
	SRR5643659	five period of Gastrodia elata	4.940
	SRR5643660	five period of Gastrodia elata	4.640
	SRR5643661	five period of Gastrodia elata	4.540
	SRR5643662	five period of Gastrodia elata	4.460
	SRR5643663	five period of Gastrodia elata	4.830
	SRR5643664	five period of Gastrodia elata	4.580
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.660
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.800
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.920
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.840
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.060
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.960
SRP279888	Gastro	Gastrodia elata tuber	3.60
	Juven	Juvenile tuber	6.14
	Mother_Gastro	Mother tuber of Gastrodia elata	3.75
	Mother_Juven	Mother tuber of Juvenile	4.63