Detail information of GWHGAAEX008335/evm.TU.scaffold_215.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743847768|ref|XP_010939184.1|1.33E-67PREDICTED: ninja-family protein Os07g0602900 [Elaeis guineensis]
Swissprottr|B1B5D5|NNJA3_WHEAT1.00E-53Ninja-family protein 3
trEMBLtr|M0SNV2|M0SNV2_MUSAM8.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P14370_001}
TAIRAT3G295753.00E-49ABI five binding protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000214129781132128+
Transcript Sequence

Network for GWHGAAEX008335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07897.10EAR25572.10E-08
PF16136.4NINJA_B691621.90E-13
PF16135.4Jas2112764.80E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.650
SRR2545915Juvenile tuber18.120
SRP108465SRR5643513five period of Gastrodia elata12.860
SRR5643514five period of Gastrodia elata15.630
SRR5643515five period of Gastrodia elata13.430
SRR5643524five period of Gastrodia elata11.130
SRR5643525five period of Gastrodia elata15.090
SRR5643528five period of Gastrodia elata6.560
SRR5643658five period of Gastrodia elata12.810
SRR5643659five period of Gastrodia elata15.820
SRR5643660five period of Gastrodia elata13.690
SRR5643661five period of Gastrodia elata19.760
SRR5643662five period of Gastrodia elata15.410
SRR5643663five period of Gastrodia elata10.170
SRR5643664five period of Gastrodia elata15.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.090
SRR6049655Rhizomagastrodiae_C368-T10_good_120.070
SRR6049656Rhizomagastrodiae_C368-T07_good_120.320
SRR6049657Rhizomagastrodiae_C368-T07_good_121.650
SRR6049658Rhizomagastrodiae_C368-T04_good_122.710
SRR6049659Rhizomagastrodiae_C368-T04_good_120.190
SRR6049660Rhizomagastrodiae_C368-T01_good_127.750
SRR6049661Rhizomagastrodiae_C368-T04_good_120.670
SRR6049662Rhizomagastrodiae_C368-T01_good_118.370
SRR6049663Rhizomagastrodiae_C368-T01_good_122.670
SRR6049664Rhizomagastrodiae_C368-T10_good_118.130
SRR6049665Rhizomagastrodiae_C368-T10_good_118.130
SRP279888GastroGastrodia elata tuber 11.85
JuvenJuvenile tuber9.37
Mother_GastroMother tuber of Gastrodia elata 23.82
Mother_JuvenMother tuber of Juvenile 11.58