Gene detail

Detail information of GWHGAAEX008340/evm.TU.scaffold_215.10

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0770	2.00E-156	Predicted mitochondrial carrier protein
nr	gi\|672110226\|ref\|XP_008794194.1\|	0	PREDICTED: mitochondrial substrate carrier family protein E isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q94AG6\|SAMC1_ARATH	1.00E-47	S-adenosylmethionine carrier 1, chloroplastic/mitochondrial (Precursor)
trEMBL	tr\|M0SKP1\|M0SKP1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P03240_001}
TAIR	AT1G74240	2.00E-156	Mitochondrial substrate carrier family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000214	335450	347145	+

Transcript Sequence
>GWHTAAEX008340 GTTCTTTTCCAGGCATGACAAACGGTGTTCGATACTATGGTTCTCCGTGAACGCGGCCGTTTCTAAAACCCTAGGTTATTAACTTTATTGCAGCAAGGTTTTAAGAGTGAGAAAGAGCAGTACCATCGCTTTCCGGCACTTCTTTCCCAGGTGCCATGAAGGCATCCACTTCTTCCGCCGAGCTCAATCTTTCTAAGAGGCGATCGGATAACTTCTTTGTATGGAGAGAGTTTGTTTGGGGTGCTTTAGCTGGGGCCTTTGGGGAAGGCATGATGCACCCAGTAGACACAGTGAAGACAAGGATTCAGAGCCAAGCTATAATTATTGGACGTCAGGGACAAAAGAGCGTATTTCAGATGATCCGAGCTGTTTGGGTTTCAGATGGTATAAAAGGATTTTATCGAGGCATTGCCCCAGGGGTTATGGGATCTCTGGCAACAGGGGCAACATATTTTGGTGTTATTGAATCTACAAAACAATGGATAGAGGTTGTGAACCCAAATCTTGGTGGCCATTGGGCACATTTTATTGCTGGAGCCATTGGTGACACACTTGGTTCATTTGTGTATGTTCCATGTGAAGTTATAAAACAGCGGATGCAGGTTCAAGGGACTAAAAATTCATGGAGTTCTGCAATGCTAAAAGAAATCCCTTCCCAGAAATGTGGGGAACTGATGTATTGTTATTATACAGGAATGCTTCAGGCAGGCCACTCAATTTGGAAGGAACATGGTCTAAAGGGATTGTATGCAGGGTACTGGTCCACACTAGCAAGGGACGTACCTTTTGCTGGTCTTATGGTTACTTTCTATGAGGGGTTTAAAAATTTGACTGGATATGGGAAACAGAGATTGTTACCTGGTAGTAATGTTCATATTAACAGTTCTTTTGAAGGACTGCTGCTTGGAGGATTGGCTGGTGGTCTGAGTGCTTATCTTACAACTCCATTGGACGTTATAAAAACAAGATTGCAAGTACAGGGATCTAGCATGAGGTACAATGGCTGGTTTGATGCACTGAGAAGCATTTGGAAGGCAGAGGGTGCGAATGGCCTTTTCAAGGGCAGCGTCCCGAGAATCATGTGGTACATTCCTGCATCTGCTCTCACTTTTATGGCAGTTGAATTTCTGCGTGATAATTTCAATGAAAAATCTGTCTCTCGTGTTCATGAAATCACCGGTAGTATGTCCATAGAGCCAAGCTCCAGCATTCAAAAAACGGTCAGATGAAACTGTTACAACTGTAGTTTTGATTTGTAAGCTAGACATTTTGTCGAGGCCTGTCATTTTTTAAGGGAATTATTCTATTCTTGAGGGGCCTAAACTTCTCTTCTATATTCAATATTCAGTCCTTTTTTTAAACTTGATGATGCAGTAAGCGTTTTTCCTTCGAGCCTCATGATCAGTTTGTCAAGTGAGCAATTATTATTTTTCATTCGCTGTTCAGTTTAATATCCTGAAACTTTGCACTAACTCCATTGATGAGGTGCCAAAATCGAAGTACAAAGTAGGAGATTGATTACACG

Network for GWHGAAEX008340

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.26	Mito_carr	21	110	2.80E-20
PF00153.26	Mito_carr	120	225	2.40E-19
PF00153.26	Mito_carr	244	332	1.80E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.800
SRP064423	SRR2545915	Juvenile tuber	13.300
SRP108465	SRR5643513	five period of Gastrodia elata	9.780
	SRR5643514	five period of Gastrodia elata	9.280
	SRR5643515	five period of Gastrodia elata	9.020
	SRR5643524	five period of Gastrodia elata	7.440
	SRR5643525	five period of Gastrodia elata	5.510
	SRR5643528	five period of Gastrodia elata	4.180
	SRR5643658	five period of Gastrodia elata	3.350
	SRR5643659	five period of Gastrodia elata	12.620
	SRR5643660	five period of Gastrodia elata	14.260
	SRR5643661	five period of Gastrodia elata	12.480
	SRR5643662	five period of Gastrodia elata	11.620
	SRR5643663	five period of Gastrodia elata	10.810
	SRR5643664	five period of Gastrodia elata	11.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.650
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.770
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.120
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	7.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.980
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.770
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.060
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.060
SRP279888	Gastro	Gastrodia elata tuber	16.30
	Juven	Juvenile tuber	18.16
	Mother_Gastro	Mother tuber of Gastrodia elata	4.49
	Mother_Juven	Mother tuber of Juvenile	7.97