Detail information of GWHGAAEX008343/evm.TU.scaffold_215.13
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|307154088|ref|YP_003889472.1| | 7.00E-16 | PBS lyase HEAT domain-containing protein [Cyanothece sp. PCC 7822] |
| KOG | KOG0567 | 9.00E-134 | HEAT repeat-containing protein |
| nr | gi|743835262|ref|XP_010935762.1| | 6.81E-167 | PREDICTED: deoxyhypusine hydroxylase-B isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q2QXB3|DOHH1_ORYSJ | 4.00E-150 | Deoxyhypusine hydroxylase-A {ECO:0000255|HAMAP-Rule:MF_03101} |
| trEMBL | tr|W5GAX6|W5GAX6_WHEAT | 3.00E-153 | Deoxyhypusine hydroxylase {ECO:0000256|HAMAP-Rule:MF_03101} |
| TAIR | AT3G58180 | 9.00E-134 | ARM repeat superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000214 | 366022 | 390336 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008343
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13646.5 | HEAT_2 | 48 | 134 | 1.20E-14 |
| PF13646.5 | HEAT_2 | 217 | 290 | 1.70E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008612 | Biological Process | peptidyl-lysine modification to peptidyl-hypusine |
| GO:0019135 | Molecular Function | deoxyhypusine monooxygenase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.180 |
| SRR2545915 | Juvenile tuber | 11.720 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.130 |
| SRR5643514 | five period of Gastrodia elata | 9.800 | |
| SRR5643515 | five period of Gastrodia elata | 9.880 | |
| SRR5643524 | five period of Gastrodia elata | 11.120 | |
| SRR5643525 | five period of Gastrodia elata | 12.820 | |
| SRR5643528 | five period of Gastrodia elata | 14.080 | |
| SRR5643658 | five period of Gastrodia elata | 14.220 | |
| SRR5643659 | five period of Gastrodia elata | 7.140 | |
| SRR5643660 | five period of Gastrodia elata | 8.240 | |
| SRR5643661 | five period of Gastrodia elata | 7.810 | |
| SRR5643662 | five period of Gastrodia elata | 8.590 | |
| SRR5643663 | five period of Gastrodia elata | 9.070 | |
| SRR5643664 | five period of Gastrodia elata | 8.080 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.660 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.430 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.660 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.370 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.140 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.280 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.280 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.76 |
| Juven | Juvenile tuber | 11.23 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.03 | |
| Mother_Juven | Mother tuber of Juvenile | 13.51 |