Detail information of GWHGAAEX008352/evm.TU.scaffold_215.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428218942|ref|YP_007103407.1|3.00E-33cobalamin synthesis protein P47K [Pseudanabaena sp. PCC 7367]
KOGKOG27439.00E-37Cobalamin synthesis protein
nrgi|695037021|ref|XP_009405987.1|3.38E-84PREDICTED: COBW domain-containing protein 1 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0T9V6|M0T9V6_MUSAM8.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P24600_001}
TAIRAT1G265209.00E-37Cobalamin biosynthesis CobW-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000214514389521418-
Transcript Sequence

Network for GWHGAAEX008352

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02492.18cobW1001647.80E-06
PF07683.13CobW_C2143064.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.030
SRR2545915Juvenile tuber27.260
SRP108465SRR5643513five period of Gastrodia elata19.160
SRR5643514five period of Gastrodia elata18.790
SRR5643515five period of Gastrodia elata20.270
SRR5643524five period of Gastrodia elata20.990
SRR5643525five period of Gastrodia elata37.750
SRR5643528five period of Gastrodia elata34.840
SRR5643658five period of Gastrodia elata42.910
SRR5643659five period of Gastrodia elata19.270
SRR5643660five period of Gastrodia elata17.060
SRR5643661five period of Gastrodia elata20.230
SRR5643662five period of Gastrodia elata15.250
SRR5643663five period of Gastrodia elata15.090
SRR5643664five period of Gastrodia elata15.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.030
SRR6049655Rhizomagastrodiae_C368-T10_good_111.440
SRR6049656Rhizomagastrodiae_C368-T07_good_118.840
SRR6049657Rhizomagastrodiae_C368-T07_good_119.200
SRR6049658Rhizomagastrodiae_C368-T04_good_119.740
SRR6049659Rhizomagastrodiae_C368-T04_good_120.910
SRR6049660Rhizomagastrodiae_C368-T01_good_117.620
SRR6049661Rhizomagastrodiae_C368-T04_good_117.470
SRR6049662Rhizomagastrodiae_C368-T01_good_118.690
SRR6049663Rhizomagastrodiae_C368-T01_good_119.230
SRR6049664Rhizomagastrodiae_C368-T10_good_117.310
SRR6049665Rhizomagastrodiae_C368-T10_good_117.310
SRP279888GastroGastrodia elata tuber 25.15
JuvenJuvenile tuber16.66
Mother_GastroMother tuber of Gastrodia elata 28.43
Mother_JuvenMother tuber of Juvenile 18.62