Detail information of GWHGAAEX008353/evm.TU.scaffold_215.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37520103|ref|NP_923480.1|2.00E-39hypothetical protein glr0534 [Gloeobacter violaceus PCC 7421]
KOGKOG27438.00E-78Cobalamin synthesis protein
nrgi|743837174|ref|XP_010936323.1|2.90E-82PREDICTED: COBW domain-containing protein 1 isoform X2 [Elaeis guineensis]
trEMBLtr|A0A067DCU6|A0A067DCU6_CITSI1.00E-82Uncharacterized protein {ECO:0000313|EMBL:KDO36837.1}
TAIRAT1G265208.00E-78Cobalamin biosynthesis CobW-like protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000214521854542346-
Transcript Sequence

Network for GWHGAAEX008353

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02492.18cobW421661.30E-38
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.410
SRR2545915Juvenile tuber22.080
SRP108465SRR5643513five period of Gastrodia elata17.480
SRR5643514five period of Gastrodia elata19.720
SRR5643515five period of Gastrodia elata17.790
SRR5643524five period of Gastrodia elata18.990
SRR5643525five period of Gastrodia elata49.140
SRR5643528five period of Gastrodia elata32.840
SRR5643658five period of Gastrodia elata44.910
SRR5643659five period of Gastrodia elata21.190
SRR5643660five period of Gastrodia elata24.000
SRR5643661five period of Gastrodia elata21.950
SRR5643662five period of Gastrodia elata20.130
SRR5643663five period of Gastrodia elata17.450
SRR5643664five period of Gastrodia elata21.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.380
SRR6049655Rhizomagastrodiae_C368-T10_good_112.910
SRR6049656Rhizomagastrodiae_C368-T07_good_119.970
SRR6049657Rhizomagastrodiae_C368-T07_good_124.360
SRR6049658Rhizomagastrodiae_C368-T04_good_125.140
SRR6049659Rhizomagastrodiae_C368-T04_good_120.830
SRR6049660Rhizomagastrodiae_C368-T01_good_121.410
SRR6049661Rhizomagastrodiae_C368-T04_good_118.430
SRR6049662Rhizomagastrodiae_C368-T01_good_120.360
SRR6049663Rhizomagastrodiae_C368-T01_good_125.240
SRR6049664Rhizomagastrodiae_C368-T10_good_117.130
SRR6049665Rhizomagastrodiae_C368-T10_good_117.130
SRP279888GastroGastrodia elata tuber 23.99
JuvenJuvenile tuber22.75
Mother_GastroMother tuber of Gastrodia elata 22.90
Mother_JuvenMother tuber of Juvenile 25.26