Gene detail

Detail information of GWHGAAEX008361/evm.TU.scaffold_215.32

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|220925705\|ref\|YP_002501007.1\|	1.00E-07	glycosyl transferase family protein [Methylobacterium nodulans ORS 2060]
nr	gi\|672170094\|ref\|XP_008805098.1\|	0	PREDICTED: probable galacturonosyltransferase 14 [Phoenix dactylifera]
Swissprot	tr\|Q8GWT1\|GAUTE_ARATH	0	Probable galacturonosyltransferase 14
trEMBL	tr\|M0S7P4\|M0S7P4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr2P13530_001}
TAIR	AT5G15470	0	galacturonosyltransferase 14

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000214	877672	901320	+

Transcript Sequence
>GWHTAAEX008361 CTGCATCAGGTCTCCTTCCCACCTCATGTCAGGGCCGAATGCTCATCTCAATCGTCCCGCAATTAAATTACCCTGCAGAAGCTGAATCGAGCTGAAGAAATTAAATCACATGAGGACTCCGGTCATAAATTCCTGCAACCCTCCATTGCTTTCCTCCATATTCTTCTTATGCTGGTGATTTATCCGATCCGATCCATTTCTCTGTCGCCATCGCAGCCTCAGGCGGGCAAAGATATTGCCGCAATCTATAGGCGGATTCATTGGAGAGGAGGATGCAGCTCCGGTTATCGCCGAGCATGAGAAGTATCACGATATCGAGCAGCTATGGTGTCCTCGACTCGATGAAGGTCAAGGTCGGCTCTCGGCCGTTATCTTACCGGAACCTCTTTTACACAATATTGGCCCTCGCCTTCCTCCTTCCCTTCGTCTTCATTCTTACTGCCGTGGTAACTCTTGAGGGCGTTGATGAGTGCTCCTCCCTTGATTGTTTAGGAAGGCGACTAAGCCCAAAGTTACTTGGAAGGGGAACTAAAAGTGATTCAACGAGACTACTGACAGATTTTTATGAATTACTTTATGAAGTTGATACCAAGGATATTCCAGCTGAAGTGAGGTTACCTGCATCATTCAGTGAATTTCTGTTAGAAATGAAGAATAACCAGCATGATATTAAAACATTTGCTGTATTCTTGAAGGCAACGATGGAAAGCTTAGATAAAGAGGTAAAGAGATCAAAGCTAGCTGAGGAATTGAACAAGCATTACGCAGCCGATGCTATTCCTAAAGGCATTCATTGTCTATCCTTAAGACTAGCTGATGAGTACTCTTCTAATGCCCGTGCACGGAAACAATTGCCTCCTCCAGAGATGTTACCTTTGCTCTCTGATAACTCATATCAGCATTTTATTCTATCAACAGACAATGTACTTGCAGCCTCTGTTGTTGTTAACTCTACTGTGAAATCTTCAGTGATGCCCAAGAAAATTGTCTTTCATGTAATCACTGACAAGAAGACATATCCAGCAATGCATTCATGGTTTGCTCTGTATCCCCCTTCCCCAGCACTTGTTGAGGTTAAAGGTGTGCACCAGTTTGATTGGTTGACGAGGGAAAATATTCCTGTTCTTGAGGCTATAGAGAGTCACCATGTTGTTCGAAATCATTATCTTGGAAACCATGTTATGGGAATTAATGTTACAGACACTCCAAGGATTTTTGCCTCAAAGCTGCTAGCTAAAAGTCCAAAATATATTTCTATACTCAACCATCTTCGGATATACTTGCCGGAGCTTTTTCCAAACCTGAACAAAGTGATCTTTCTTGATGATGATGTTGTTGTTCAGCGTGACCTGTCACCACTGTGGAACATAAATATGGCAGGAAAGGTGAATGGGGCTGTAGAAACATGTAAAGGCGAGGATAAATGGGTTATGTCAAAACATTTTAGGACATATTTCAATTTTTCTCATCCTATCATTTCAAAGAATTTAAATCCGGATGAGTGCGCATGGGCATATGGGATGAATATTTTTGATTTAAGTGCATGGAGAAAAACAAGAATTAGAGACACTTATCACTATTGGCTGAAGGAGAATCTTAATTCTAACCTGACATTATGGAAGTTCGGGACACTGCCACCAGCTCTCATAGCATTCAGGGGATATATCTACCCTTTAGATCCCTCATGGCATATGCTAGGGTTAGGCTATCAAGAGAATGCAGATCTTGACAGTGTTAAAAGAGCCGCTGTTATTCACTACAATGGTCAGTGCAAGCCATGGCTGGATATTGGTTTCAGGCATTTGCAGCCTTTCTGGACAAAGCATGTAAACTACTCCAATGATTTCATCAGAAATTGCCACATTTTGGAGCCTGAAGAATAAAAAAAAGATTACACCACAGTCTTACACTGGAACAGGCTCACTTTTTCTATAATTACATTCTTTGATTTTGTTAACATGTTGTTGGTTCAAGTTGCAATTTATATATATTATACATATGAATCAGAAAAGGAGGCATAAAATTCAGTAGCTGGAGTTGCTTACACAATTGCAGAAGCAAAGCTTGCAGTGGTGCAATTGCCTGTAACTCCTCACCCTTTTTTCATTTTATTTCCTTAGCTTTAGTTTTAACTGTAATTCTTTCTTTTACCTCCATTTTCTTTCTTTTTGTAATATCATTGCTTTATAATTTTGCAAAGAATTTGTAGGGAAAATTAAAATTTGTCAGGAGAAATTATTGTTGATCTGTACACATAATTCTTTTGTTGAAGCTGTGCATATGTATATATGTTTCTTCTTCTACCTTCATGCTATTATCCTTCTTTTTTGTATGGAGTTTCATCCTTGCAATTCCTGGTAGGGAATATGGCAGGTTTGTAAAAAGCCCAAAAAATATTC

Network for GWHGAAEX008361

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	175	506	1.50E-84

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT8
Carbohydrate-Active enzymes Family	GT8

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.320
SRP064423	SRR2545915	Juvenile tuber	10.600
SRP108465	SRR5643513	five period of Gastrodia elata	10.650
	SRR5643514	five period of Gastrodia elata	10.220
	SRR5643515	five period of Gastrodia elata	13.500
	SRR5643524	five period of Gastrodia elata	11.740
	SRR5643525	five period of Gastrodia elata	15.020
	SRR5643528	five period of Gastrodia elata	19.590
	SRR5643658	five period of Gastrodia elata	15.040
	SRR5643659	five period of Gastrodia elata	9.620
	SRR5643660	five period of Gastrodia elata	8.080
	SRR5643661	five period of Gastrodia elata	7.390
	SRR5643662	five period of Gastrodia elata	12.430
	SRR5643663	five period of Gastrodia elata	8.970
	SRR5643664	five period of Gastrodia elata	9.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	13.460
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.450
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.710
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.370
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.270
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.110
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	15.250
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	17.200
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.510
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.510
SRP279888	Gastro	Gastrodia elata tuber	14.44
	Juven	Juvenile tuber	7.17
	Mother_Gastro	Mother tuber of Gastrodia elata	37.84
	Mother_Juven	Mother tuber of Juvenile	36.63