Detail information of GWHGAAEX008364/evm.TU.scaffold_215.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|269125897|ref|YP_003299267.1|2.00E-41saccharopine dehydrogenase [Thermomonospora curvata DSM 43183]
KOGKOG27330Uncharacterized membrane protein
nrgi|672133137|ref|XP_008790174.1|0PREDICTED: probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 [Phoenix dactylifera]
Swissprottr|Q8LGI2|SCPDL_ARATH0Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410
trEMBLtr|A0A067JTH7|A0A067JTH7_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP27197.1}
TAIRAT5G394100Saccharopine dehydrogenase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000214969247984221+
Transcript Sequence

Network for GWHGAAEX008364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03435.17Sacchrp_dh_NADP131471.10E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.300
SRR2545915Juvenile tuber29.240
SRP108465SRR5643513five period of Gastrodia elata20.980
SRR5643514five period of Gastrodia elata21.390
SRR5643515five period of Gastrodia elata19.610
SRR5643524five period of Gastrodia elata18.560
SRR5643525five period of Gastrodia elata11.620
SRR5643528five period of Gastrodia elata19.260
SRR5643658five period of Gastrodia elata15.770
SRR5643659five period of Gastrodia elata16.230
SRR5643660five period of Gastrodia elata17.680
SRR5643661five period of Gastrodia elata18.270
SRR5643662five period of Gastrodia elata14.670
SRR5643663five period of Gastrodia elata16.080
SRR5643664five period of Gastrodia elata16.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.840
SRR6049655Rhizomagastrodiae_C368-T10_good_120.000
SRR6049656Rhizomagastrodiae_C368-T07_good_141.280
SRR6049657Rhizomagastrodiae_C368-T07_good_130.050
SRR6049658Rhizomagastrodiae_C368-T04_good_136.310
SRR6049659Rhizomagastrodiae_C368-T04_good_128.470
SRR6049660Rhizomagastrodiae_C368-T01_good_136.580
SRR6049661Rhizomagastrodiae_C368-T04_good_139.330
SRR6049662Rhizomagastrodiae_C368-T01_good_153.860
SRR6049663Rhizomagastrodiae_C368-T01_good_148.660
SRR6049664Rhizomagastrodiae_C368-T10_good_144.250
SRR6049665Rhizomagastrodiae_C368-T10_good_144.250
SRP279888GastroGastrodia elata tuber 25.34
JuvenJuvenile tuber15.63
Mother_GastroMother tuber of Gastrodia elata 21.22
Mother_JuvenMother tuber of Juvenile 15.81