Detail information of GWHGAAEX008366/evm.TU.scaffold_215.37
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|83647568|ref|YP_436003.1| | 5.00E-21 | serine/threonine protein kinase [Hahella chejuensis KCTC 2396] |
| KOG | KOG0600 | 0 | Cdc2-related protein kinase |
| nr | gi|743847299|ref|XP_010939059.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Elaeis guineensis] |
| Swissprot | tr|Q9ZVM9|Y1461_ARATH | 2.00E-178 | Probable serine/threonine-protein kinase At1g54610 |
| trEMBL | tr|M0SJ41|M0SJ41_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P30270_001} |
| TAIR | AT1G18670 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000214 | 1008999 | 1031638 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008366
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 145 | 429 | 5.20E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_CDK-CRK7-CDK9 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 4.640 |
| SRR2545915 | Juvenile tuber | 13.770 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.730 |
| SRR5643514 | five period of Gastrodia elata | 12.560 | |
| SRR5643515 | five period of Gastrodia elata | 7.840 | |
| SRR5643524 | five period of Gastrodia elata | 15.550 | |
| SRR5643525 | five period of Gastrodia elata | 17.960 | |
| SRR5643528 | five period of Gastrodia elata | 16.500 | |
| SRR5643658 | five period of Gastrodia elata | 23.450 | |
| SRR5643659 | five period of Gastrodia elata | 14.360 | |
| SRR5643660 | five period of Gastrodia elata | 16.640 | |
| SRR5643661 | five period of Gastrodia elata | 13.260 | |
| SRR5643662 | five period of Gastrodia elata | 17.410 | |
| SRR5643663 | five period of Gastrodia elata | 16.140 | |
| SRR5643664 | five period of Gastrodia elata | 17.450 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.190 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.340 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.370 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.510 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.490 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.640 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.780 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.070 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.070 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.59 |
| Juven | Juvenile tuber | 5.21 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.85 | |
| Mother_Juven | Mother tuber of Juvenile | 5.02 |