Detail information of GWHGAAEX008367/evm.TU.scaffold_215.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434388384|ref|YP_007098995.1|3.00E-30AAA+ family ATPase [Chamaesiphon minutus PCC 6605]
KOGKOG07434.00E-158AAA+-type ATPase
nrgi|743758145|ref|XP_010925278.1|0PREDICTED: probable mitochondrial chaperone BCS1-B [Elaeis guineensis]
Swissprottr|Q9C5U3|PRS8A_ARATH1.00E-1326S protease regulatory subunit 8 homolog A
trEMBLtr|I1GZH1|I1GZH1_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G44957.1}
TAIRAT3G509304.00E-158cytochrome BC1 synthesis

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021410678611069333+
Transcript Sequence

Network for GWHGAAEX008367

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14363.5AAA_assoc361285.00E-23
PF00004.28AAA2453751.90E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.300
SRR2545915Juvenile tuber21.550
SRP108465SRR5643513five period of Gastrodia elata22.620
SRR5643514five period of Gastrodia elata17.490
SRR5643515five period of Gastrodia elata30.270
SRR5643524five period of Gastrodia elata16.010
SRR5643525five period of Gastrodia elata75.430
SRR5643528five period of Gastrodia elata78.500
SRR5643658five period of Gastrodia elata41.780
SRR5643659five period of Gastrodia elata39.600
SRR5643660five period of Gastrodia elata23.230
SRR5643661five period of Gastrodia elata34.070
SRR5643662five period of Gastrodia elata46.540
SRR5643663five period of Gastrodia elata39.000
SRR5643664five period of Gastrodia elata195.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_164.090
SRR6049655Rhizomagastrodiae_C368-T10_good_185.750
SRR6049656Rhizomagastrodiae_C368-T07_good_141.630
SRR6049657Rhizomagastrodiae_C368-T07_good_140.980
SRR6049658Rhizomagastrodiae_C368-T04_good_150.070
SRR6049659Rhizomagastrodiae_C368-T04_good_162.160
SRR6049660Rhizomagastrodiae_C368-T01_good_183.400
SRR6049661Rhizomagastrodiae_C368-T04_good_155.900
SRR6049662Rhizomagastrodiae_C368-T01_good_170.420
SRR6049663Rhizomagastrodiae_C368-T01_good_197.790
SRR6049664Rhizomagastrodiae_C368-T10_good_184.560
SRR6049665Rhizomagastrodiae_C368-T10_good_184.560
SRP279888GastroGastrodia elata tuber 14.99
JuvenJuvenile tuber7.82
Mother_GastroMother tuber of Gastrodia elata 109.26
Mother_JuvenMother tuber of Juvenile 42.36