Detail information of GWHGAAEX008369/evm.TU.scaffold_215.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24430Uncharacterized conserved protein
nrgi|672133009|ref|XP_008790105.1|0PREDICTED: signal peptide peptidase 2-like [Phoenix dactylifera]
Swissprottr|Q6ZGL9|SIP1_ORYSJ0Signal peptide peptidase 1
trEMBLtr|V4W0Y3|V4W0Y3_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR59514.1}
TAIRAT2G031200signal peptide peptidase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000021411195361134760-
Transcript Sequence

Network for GWHGAAEX008369

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04258.12Peptidase_A22B513228.00E-90
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0004190Molecular Functionaspartic-type endopeptidase activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms136.850
SRR2545915Juvenile tuber126.020
SRP108465SRR5643513five period of Gastrodia elata76.990
SRR5643514five period of Gastrodia elata73.180
SRR5643515five period of Gastrodia elata66.950
SRR5643524five period of Gastrodia elata77.720
SRR5643525five period of Gastrodia elata83.450
SRR5643528five period of Gastrodia elata82.240
SRR5643658five period of Gastrodia elata77.520
SRR5643659five period of Gastrodia elata68.870
SRR5643660five period of Gastrodia elata67.100
SRR5643661five period of Gastrodia elata71.170
SRR5643662five period of Gastrodia elata60.620
SRR5643663five period of Gastrodia elata68.880
SRR5643664five period of Gastrodia elata51.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1102.570
SRR6049655Rhizomagastrodiae_C368-T10_good_1131.510
SRR6049656Rhizomagastrodiae_C368-T07_good_1101.130
SRR6049657Rhizomagastrodiae_C368-T07_good_1109.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1112.960
SRR6049659Rhizomagastrodiae_C368-T04_good_1113.610
SRR6049660Rhizomagastrodiae_C368-T01_good_1110.040
SRR6049661Rhizomagastrodiae_C368-T04_good_1109.050
SRR6049662Rhizomagastrodiae_C368-T01_good_192.420
SRR6049663Rhizomagastrodiae_C368-T01_good_1102.510
SRR6049664Rhizomagastrodiae_C368-T10_good_1108.050
SRR6049665Rhizomagastrodiae_C368-T10_good_1108.050
SRP279888GastroGastrodia elata tuber 74.93
JuvenJuvenile tuber84.71
Mother_GastroMother tuber of Gastrodia elata 94.21
Mother_JuvenMother tuber of Juvenile 103.03