Detail information of GWHGAAEX008373/evm.TU.scaffold_216.10
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG4293 | 3.00E-109 | Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains |
| nr | gi|743771302|ref|XP_010915939.1| | 8.98E-167 | PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g61750 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q9M363|B561I_ARATH | 9.00E-110 | Cytochrome b561 and DOMON domain-containing protein At3g61750 (Precursor) |
| trEMBL | tr|M0TAF8|M0TAF8_MUSAM | 7.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P26630_001} |
| TAIR | AT3G61750 | 3.00E-109 | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000211 | 616825 | 626199 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008373
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03351.16 | DOMON | 65 | 122 | 4.10E-09 |
| PF03188.15 | Cytochrom_B561 | 204 | 324 | 3.20E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 12.170 |
| SRR2545915 | Juvenile tuber | 13.290 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.340 |
| SRR5643514 | five period of Gastrodia elata | 16.620 | |
| SRR5643515 | five period of Gastrodia elata | 13.040 | |
| SRR5643524 | five period of Gastrodia elata | 10.940 | |
| SRR5643525 | five period of Gastrodia elata | 47.330 | |
| SRR5643528 | five period of Gastrodia elata | 38.280 | |
| SRR5643658 | five period of Gastrodia elata | 73.270 | |
| SRR5643659 | five period of Gastrodia elata | 9.660 | |
| SRR5643660 | five period of Gastrodia elata | 7.450 | |
| SRR5643661 | five period of Gastrodia elata | 9.470 | |
| SRR5643662 | five period of Gastrodia elata | 7.450 | |
| SRR5643663 | five period of Gastrodia elata | 8.020 | |
| SRR5643664 | five period of Gastrodia elata | 5.960 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 17.640 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.050 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 19.900 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.960 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.180 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 14.090 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.070 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.480 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.450 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.680 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.680 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.70 |
| Juven | Juvenile tuber | 5.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.54 | |
| Mother_Juven | Mother tuber of Juvenile | 1.52 |