Detail information of GWHGAAEX008375/evm.TU.scaffold_216.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG44131.00E-15626S proteasome regulatory complex, subunit PSMD5
nrgi|672163305|ref|XP_008801496.1|0PREDICTED: uncharacterized protein LOC103715588 isoform X1 [Phoenix dactylifera]
trEMBLtr|M0SF62|M0SF62_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P16460_001}
TAIRAT3G151801.00E-156ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000211740745831804+
Transcript Sequence

Network for GWHGAAEX008375

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10508.8Proteasom_PSMB615095.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0043248Biological Processproteasome assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.500
SRR2545915Juvenile tuber41.340
SRP108465SRR5643513five period of Gastrodia elata21.700
SRR5643514five period of Gastrodia elata28.840
SRR5643515five period of Gastrodia elata24.200
SRR5643524five period of Gastrodia elata26.760
SRR5643525five period of Gastrodia elata23.510
SRR5643528five period of Gastrodia elata22.840
SRR5643658five period of Gastrodia elata23.210
SRR5643659five period of Gastrodia elata21.810
SRR5643660five period of Gastrodia elata22.060
SRR5643661five period of Gastrodia elata17.800
SRR5643662five period of Gastrodia elata16.450
SRR5643663five period of Gastrodia elata16.010
SRR5643664five period of Gastrodia elata19.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.700
SRR6049655Rhizomagastrodiae_C368-T10_good_123.790
SRR6049656Rhizomagastrodiae_C368-T07_good_118.190
SRR6049657Rhizomagastrodiae_C368-T07_good_117.060
SRR6049658Rhizomagastrodiae_C368-T04_good_115.630
SRR6049659Rhizomagastrodiae_C368-T04_good_115.100
SRR6049660Rhizomagastrodiae_C368-T01_good_116.770
SRR6049661Rhizomagastrodiae_C368-T04_good_115.380
SRR6049662Rhizomagastrodiae_C368-T01_good_121.470
SRR6049663Rhizomagastrodiae_C368-T01_good_119.380
SRR6049664Rhizomagastrodiae_C368-T10_good_128.710
SRR6049665Rhizomagastrodiae_C368-T10_good_128.710
SRP279888GastroGastrodia elata tuber 33.07
JuvenJuvenile tuber27.69
Mother_GastroMother tuber of Gastrodia elata 22.02
Mother_JuvenMother tuber of Juvenile 26.48