Detail information of GWHGAAEX008382/evm.TU.scaffold_2165.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|295697231|ref|YP_003590469.1|5.00E-29heavy metal translocating P-type ATPase [Kyrpidia tusciae DSM 2912]
KOGKOG02072.00E-38Cation transport ATPase
nrgi|672158085|ref|XP_008798771.1|5.01E-60PREDICTED: probable copper-transporting ATPase HMA5 [Phoenix dactylifera]
Swissprottr|Q9SH30|HMA5_ARATH7.00E-39Probable copper-transporting ATPase HMA5
trEMBLtr|V7AKW0|V7AKW0_PHAVU6.00E-60Uncharacterized protein {ECO:0000313|EMBL:ESW06149.1}
TAIRAT1G634402.00E-38heavy metal atpase 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00002157487972+
Transcript Sequence

Network for GWHGAAEX008382

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00702.25Hydrolase31626.30E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K17686copA, ctpA, ATP7 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName
GO:0000166Molecular Functionnucleotide binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.070
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata36.410
SRR5643514five period of Gastrodia elata49.550
SRR5643515five period of Gastrodia elata40.230
SRR5643524five period of Gastrodia elata33.510
SRR5643525five period of Gastrodia elata15.360
SRR5643528five period of Gastrodia elata18.720
SRR5643658five period of Gastrodia elata12.700
SRR5643659five period of Gastrodia elata16.650
SRR5643660five period of Gastrodia elata18.680
SRR5643661five period of Gastrodia elata28.120
SRR5643662five period of Gastrodia elata24.850
SRR5643663five period of Gastrodia elata25.240
SRR5643664five period of Gastrodia elata31.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_149.570
SRR6049655Rhizomagastrodiae_C368-T10_good_179.020
SRR6049656Rhizomagastrodiae_C368-T07_good_156.110
SRR6049657Rhizomagastrodiae_C368-T07_good_131.440
SRR6049658Rhizomagastrodiae_C368-T04_good_139.400
SRR6049659Rhizomagastrodiae_C368-T04_good_132.780
SRR6049660Rhizomagastrodiae_C368-T01_good_127.000
SRR6049661Rhizomagastrodiae_C368-T04_good_126.310
SRR6049662Rhizomagastrodiae_C368-T01_good_134.540
SRR6049663Rhizomagastrodiae_C368-T01_good_138.310
SRR6049664Rhizomagastrodiae_C368-T10_good_1122.080
SRR6049665Rhizomagastrodiae_C368-T10_good_1122.080
SRP279888GastroGastrodia elata tuber 23.57
JuvenJuvenile tuber27.49
Mother_GastroMother tuber of Gastrodia elata 46.59
Mother_JuvenMother tuber of Juvenile 30.10