Detail information of GWHGAAEX008387/evm.TU.scaffold_217.6
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|269926326|ref|YP_003322949.1| | 4.00E-62 | inositol-phosphate phosphatase [Thermobaculum terrenum ATCC BAA-798] |
| KOG | KOG2951 | 6.00E-143 | Inositol monophosphatase |
| nr | gi|672200212|ref|XP_008777820.1| | 2.61E-159 | PREDICTED: inositol monophosphatase 3 isoform X4 [Phoenix dactylifera] |
| Swissprot | tr|P54928|IMP3_SOLLC | 1.00E-153 | Inositol monophosphatase 3 |
| trEMBL | tr|Q5U789|Q5U789_ACTDE | 2.00E-156 | L-galactose-1-phosphate phosphatase {ECO:0000313|EMBL:AAV49506.1} |
| TAIR | AT3G02870 | 6.00E-143 | Inositol monophosphatase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000221 | 260387 | 297949 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008387
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00459.24 | Inositol_P | 9 | 268 | 2.20E-76 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0046854 | Biological Process | phosphatidylinositol phosphorylation |
| GO:0046855 | Biological Process | inositol phosphate dephosphorylation |
| GO:0008934 | Molecular Function | inositol monophosphate 1-phosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 47.700 |
| SRR2545915 | Juvenile tuber | 63.880 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 48.360 |
| SRR5643514 | five period of Gastrodia elata | 56.460 | |
| SRR5643515 | five period of Gastrodia elata | 46.380 | |
| SRR5643524 | five period of Gastrodia elata | 55.710 | |
| SRR5643525 | five period of Gastrodia elata | 33.200 | |
| SRR5643528 | five period of Gastrodia elata | 24.290 | |
| SRR5643658 | five period of Gastrodia elata | 30.700 | |
| SRR5643659 | five period of Gastrodia elata | 50.630 | |
| SRR5643660 | five period of Gastrodia elata | 51.200 | |
| SRR5643661 | five period of Gastrodia elata | 54.720 | |
| SRR5643662 | five period of Gastrodia elata | 51.800 | |
| SRR5643663 | five period of Gastrodia elata | 49.730 | |
| SRR5643664 | five period of Gastrodia elata | 46.580 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 53.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 38.780 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 35.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 23.660 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.130 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 25.440 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 20.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 29.180 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.690 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 45.330 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 45.330 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 40.36 |
| Juven | Juvenile tuber | 61.04 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.42 | |
| Mother_Juven | Mother tuber of Juvenile | 33.83 |