Detail information of GWHGAAEX008388/evm.TU.scaffold_217.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743762329|ref|XP_010907602.1|5.54E-53PREDICTED: glucan endo-1,3-beta-glucosidase 1 [Elaeis guineensis]
Swissprottr|O65399|E131_ARATH3.00E-27Glucan endo-1,3-beta-glucosidase 1 (Precursor)
trEMBLtr|M0TYT2|M0TYT2_MUSAM2.00E-51Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P09230_001}
TAIRAT5G357402.00E-43Carbohydrate-binding X8 domain superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000221311651344987-
Transcript Sequence

Network for GWHGAAEX008388

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.12X8281005.00E-21
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM43

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.620
SRR2545915Juvenile tuber20.950
SRP108465SRR5643513five period of Gastrodia elata1.420
SRR5643514five period of Gastrodia elata5.370
SRR5643515five period of Gastrodia elata3.530
SRR5643524five period of Gastrodia elata6.480
SRR5643525five period of Gastrodia elata22.570
SRR5643528five period of Gastrodia elata14.930
SRR5643658five period of Gastrodia elata27.970
SRR5643659five period of Gastrodia elata4.100
SRR5643660five period of Gastrodia elata4.370
SRR5643661five period of Gastrodia elata16.550
SRR5643662five period of Gastrodia elata2.280
SRR5643663five period of Gastrodia elata2.260
SRR5643664five period of Gastrodia elata2.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.920
SRR6049655Rhizomagastrodiae_C368-T10_good_19.330
SRR6049656Rhizomagastrodiae_C368-T07_good_14.270
SRR6049657Rhizomagastrodiae_C368-T07_good_13.870
SRR6049658Rhizomagastrodiae_C368-T04_good_17.750
SRR6049659Rhizomagastrodiae_C368-T04_good_11.860
SRR6049660Rhizomagastrodiae_C368-T01_good_11.260
SRR6049661Rhizomagastrodiae_C368-T04_good_11.850
SRR6049662Rhizomagastrodiae_C368-T01_good_16.390
SRR6049663Rhizomagastrodiae_C368-T01_good_10.800
SRR6049664Rhizomagastrodiae_C368-T10_good_14.220
SRR6049665Rhizomagastrodiae_C368-T10_good_14.220
SRP279888GastroGastrodia elata tuber 3.49
JuvenJuvenile tuber5.96
Mother_GastroMother tuber of Gastrodia elata 0.54
Mother_JuvenMother tuber of Juvenile 3.51