Gene detail

Detail information of GWHGAAEX008397/evm.TU.scaffold_217.19

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672173292\|ref\|XP_008806773.1\|	1.14E-47	PREDICTED: QWRF motif-containing protein 3 [Phoenix dactylifera]
Swissprot	tr\|F4INP9\|QWRF4_ARATH	2.00E-28	QWRF motif-containing protein 4
trEMBL	tr\|K4AJU9\|K4AJU9_SETIT	2.00E-36	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si039171m}
TAIR	AT4G30710	2.00E-27	Family of unknown function (DUF566)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000221	919681	922208	+

Transcript Sequence
>GWHTAAEX008397 GTCACATTGATAAATAACAGCGGAGGAGGCCCCAGAGCTGAGGGGTGGAGCAGGCACGATTAAGCCTGAAAAAGTGAGGGCGGTGGGGAAATGGAGGGACGGCGGTGGAGCACCTCTCCGACGGGCAATTCCCCTCTGTCGGAGCACAACTCGTCGTCATCATCGTCGTGGCTGTCCCCCAGCAGCCGCAAGAGCAGCAGCATCTACTTCTCCCTCCACACCGGCGATGGCTCCGGCTCTCCTCGCCGTCCCCACCACAAGCACCGCCCCTCCGACGACGACCACCAAACCCGCGCCCTCTGGCCCTCCTCCTCTTCCAAGAAGCTCCTCGACCCTCCTCCTTCCTACAATGCCAGCACCTTCGCCTCCCGCCAGCGCATCTCCATCTCCGACCAATCCAAGGACCAGGGAGGCATGACGCCCCGGAAATCGCTAGCAGCCAAGAAGCCCGCCACGCCCCCCTCCCCCTCCTCCCACTCCTCGTCCTTCAGAAGATCCGATTCCGGGATCGATTTACCCAGCCCCGAGCCCAGGTCCGGAAGGGCGGGAGTCGGGAGTTTCTTAGCCCAAGGCCTCACCAGCTTCTTCAGGAAACAGAGGCTGCCTTCGCCCCCATCGAGGCCGGGGTTGAGATCGCCATTGAAGGAGAGAGCCAGCAGGGAGTCGCCCGCCGTAGATGTGCTCGACGGGGAGATCCACCGCCATCAGCTCAGGATCCTCCATAACTACTTGGTTCAGTGGATGTTCGTTAATGCCGGCACCCTGGTCTTCAACAACATCAAGTCTGCCAACGCCCAGAATTTGCTGGTGAACGCTTGGCTGAGACTGTCCGAATTGTGTGCCCTGGTCGCCAAGAAGCAGATGCAGCTGGACAGGGAGAAGCTCATATTTAAGCTAAGCAAGCTCCTCTGCCACCAGACCAAAGCGCTGGAGAGATGGGGAGCAACTGAGAGGCTACACGTGGCAGCACTGTCATCAACCAAAGACTCGTTGCAGGCCGCCGTCTGCCGGCTTCCTATAACTGACCGAGTGAAGGCTGATCCCACTTTGCTCTCCATTTCACTGCAACAAGCAGCAAAAATAGCCTCTGCGATCAATGGAGATGTAGCTAAATGTCATTCCATGGTACAGAGCAGAGCTCATATTGTGGCAGAACTTGCTGAGGTAGTAGCAACAGAAAAGCCTCTGCTGCAGGAGTGTATTGATTTACTAAGCCTTGTGTCAACGTTGCAGGCTCATGATGACAGTTTGAGGTCACATATTATTCAGTTAAAATCGTGCACTGCCAAACGGGTAGATGAACAAAAAAGATTTGCGGTGGAGCAGGGTTTGGATGTACAGACTACAGTCAATTCTGCATATAATTAAGGAATCATGTTATGATATCCTGGCCATAAGCATCAATCAAACATGATCTGAAAAAATAATGCCAGGGGTGTAAATTAGCCGAGTCAGCTTGCAAGCCGGCTCAAGCACGACTTTTCAATGGGCTTGTGAGCTAAGGCTCATCGATATCGAGAGCACGGCCACAGCTCGAGTCGCCTGATTGAGCCGACGAGTTTATTGATAACATTATAAGAGTTTAATGTAAGATTAACTCATTAATCTAATTAAGCTAAACCTAGGAATCACCACAAATAAAACTCATTTTAGCATCTTATTTAGGCAGCTTGCAATCCAATCGTTGAGCTCGAGCTCGCCTCGATTGCACCTAGGGAATGTGATTCAGTCCTTCTGTAATTACAATAGTCTGACTCATATGATTTATGCACCTCTATAAAAT

Network for GWHGAAEX008397

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04484.11	QWRF	45	368	4.50E-44

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.350
SRP064423	SRR2545915	Juvenile tuber	0.150
SRP108465	SRR5643513	five period of Gastrodia elata	5.430
	SRR5643514	five period of Gastrodia elata	4.660
	SRR5643515	five period of Gastrodia elata	2.760
	SRR5643524	five period of Gastrodia elata	3.050
	SRR5643525	five period of Gastrodia elata	0.820
	SRR5643528	five period of Gastrodia elata	0.590
	SRR5643658	five period of Gastrodia elata	0.890
	SRR5643659	five period of Gastrodia elata	0.040
	SRR5643660	five period of Gastrodia elata	0.200
	SRR5643661	five period of Gastrodia elata	0.120
	SRR5643662	five period of Gastrodia elata	0.160
	SRR5643663	five period of Gastrodia elata	0.030
	SRR5643664	five period of Gastrodia elata	0.150
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	7.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.830
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.480
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.480
SRP279888	Gastro	Gastrodia elata tuber	0.25
	Juven	Juvenile tuber	2.26
	Mother_Gastro	Mother tuber of Gastrodia elata	3.91
	Mother_Juven	Mother tuber of Juvenile	1.91