Detail information of GWHGAAEX008410/evm.TU.scaffold_218.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694095|ref|YP_008797149.1|2.00E-62conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum]
KOGKOG22920Oligosaccharyltransferase, STT3 subunit
nrgi|590576826|ref|XP_007013064.1|0Staurosporin and temperature sensitive 3-like A isoform 3 [Theobroma cacao]
Swissprottr|Q93ZY3|STT3A_ARATH0Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
trEMBLtr|A0A061GMT8|A0A061GMT8_THECC0Staurosporin and temperature sensitive 3-like A isoform 3 {ECO:0000313|EMBL:EOY30683.1}
TAIRAT5G196900staurosporin and temperature sensitive 3-like A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000213323860366245+
Transcript Sequence

Network for GWHGAAEX008410

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02516.13STT3246056.40E-103
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT66

KEGG pathway

KO Enzyme pathway mapID
K07151STT3 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141

Gene Ontology

GO term OntologyName
GO:0006486Biological Processprotein glycosylation
GO:0004576Molecular Functionoligosaccharyl transferase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.480
SRR2545915Juvenile tuber16.750
SRP108465SRR5643513five period of Gastrodia elata23.900
SRR5643514five period of Gastrodia elata23.210
SRR5643515five period of Gastrodia elata20.070
SRR5643524five period of Gastrodia elata22.800
SRR5643525five period of Gastrodia elata14.330
SRR5643528five period of Gastrodia elata16.970
SRR5643658five period of Gastrodia elata12.850
SRR5643659five period of Gastrodia elata20.260
SRR5643660five period of Gastrodia elata18.120
SRR5643661five period of Gastrodia elata20.000
SRR5643662five period of Gastrodia elata15.670
SRR5643663five period of Gastrodia elata17.440
SRR5643664five period of Gastrodia elata13.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.030
SRR6049655Rhizomagastrodiae_C368-T10_good_121.950
SRR6049656Rhizomagastrodiae_C368-T07_good_122.880
SRR6049657Rhizomagastrodiae_C368-T07_good_117.350
SRR6049658Rhizomagastrodiae_C368-T04_good_115.640
SRR6049659Rhizomagastrodiae_C368-T04_good_114.640
SRR6049660Rhizomagastrodiae_C368-T01_good_117.170
SRR6049661Rhizomagastrodiae_C368-T04_good_118.320
SRR6049662Rhizomagastrodiae_C368-T01_good_127.320
SRR6049663Rhizomagastrodiae_C368-T01_good_123.680
SRR6049664Rhizomagastrodiae_C368-T10_good_131.690
SRR6049665Rhizomagastrodiae_C368-T10_good_131.690
SRP279888GastroGastrodia elata tuber 19.27
JuvenJuvenile tuber33.62
Mother_GastroMother tuber of Gastrodia elata 21.46
Mother_JuvenMother tuber of Juvenile 32.21