Detail information of GWHGAAEX008414/evm.TU.scaffold_218.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392380826|ref|YP_005030022.1|5.00E-17putative metalloprotease [Azospirillum brasilense Sp245]
nrgi|743756064|ref|XP_010914881.1|3.18E-75PREDICTED: uncharacterized protein LOC105040164 isoform X2 [Elaeis guineensis]
trEMBLtr|M0SJI3|M0SJI3_MUSAM1.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P31690_001}
TAIRAT2G258602.00E-44Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000213375999388904-
Transcript Sequence

Network for GWHGAAEX008414

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02130.16UPF00541532661.10E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006364Biological ProcessrRNA processing
GO:0004222Molecular Functionmetalloendopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.720
SRR2545915Juvenile tuber24.270
SRP108465SRR5643513five period of Gastrodia elata17.430
SRR5643514five period of Gastrodia elata19.290
SRR5643515five period of Gastrodia elata20.780
SRR5643524five period of Gastrodia elata16.450
SRR5643525five period of Gastrodia elata29.570
SRR5643528five period of Gastrodia elata21.180
SRR5643658five period of Gastrodia elata23.680
SRR5643659five period of Gastrodia elata20.230
SRR5643660five period of Gastrodia elata19.450
SRR5643661five period of Gastrodia elata19.220
SRR5643662five period of Gastrodia elata16.750
SRR5643663five period of Gastrodia elata20.650
SRR5643664five period of Gastrodia elata19.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.060
SRR6049655Rhizomagastrodiae_C368-T10_good_115.600
SRR6049656Rhizomagastrodiae_C368-T07_good_118.700
SRR6049657Rhizomagastrodiae_C368-T07_good_123.200
SRR6049658Rhizomagastrodiae_C368-T04_good_133.160
SRR6049659Rhizomagastrodiae_C368-T04_good_126.570
SRR6049660Rhizomagastrodiae_C368-T01_good_123.470
SRR6049661Rhizomagastrodiae_C368-T04_good_126.530
SRR6049662Rhizomagastrodiae_C368-T01_good_124.530
SRR6049663Rhizomagastrodiae_C368-T01_good_121.880
SRR6049664Rhizomagastrodiae_C368-T10_good_120.380
SRR6049665Rhizomagastrodiae_C368-T10_good_120.380
SRP279888GastroGastrodia elata tuber 39.36
JuvenJuvenile tuber16.22
Mother_GastroMother tuber of Gastrodia elata 18.25
Mother_JuvenMother tuber of Juvenile 14.13