Detail information of GWHGAAEX008418/evm.TU.scaffold_218.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18240TATA-binding protein-interacting protein
nrgi|672142806|ref|XP_008795267.1|0PREDICTED: cullin-associated NEDD8-dissociated protein 1-like [Phoenix dactylifera]
Swissprottr|Q8L5Y6|CAND1_ARATH0Cullin-associated NEDD8-dissociated protein 1
trEMBLtr|M0RH65|M0RH65_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P10890_001}
TAIRAT2G025600cullin-associated and neddylation dissociated

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000213664532749495+
Transcript Sequence

Network for GWHGAAEX008418

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08167.11RIX13895746.60E-07
PF08623.9TIP120104211934.30E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.450
SRR2545915Juvenile tuber49.620
SRP108465SRR5643513five period of Gastrodia elata25.210
SRR5643514five period of Gastrodia elata26.590
SRR5643515five period of Gastrodia elata22.990
SRR5643524five period of Gastrodia elata25.510
SRR5643525five period of Gastrodia elata19.570
SRR5643528five period of Gastrodia elata18.170
SRR5643658five period of Gastrodia elata16.830
SRR5643659five period of Gastrodia elata23.530
SRR5643660five period of Gastrodia elata26.430
SRR5643661five period of Gastrodia elata21.520
SRR5643662five period of Gastrodia elata22.790
SRR5643663five period of Gastrodia elata25.680
SRR5643664five period of Gastrodia elata24.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.100
SRR6049655Rhizomagastrodiae_C368-T10_good_125.300
SRR6049656Rhizomagastrodiae_C368-T07_good_124.060
SRR6049657Rhizomagastrodiae_C368-T07_good_122.540
SRR6049658Rhizomagastrodiae_C368-T04_good_126.410
SRR6049659Rhizomagastrodiae_C368-T04_good_127.820
SRR6049660Rhizomagastrodiae_C368-T01_good_125.200
SRR6049661Rhizomagastrodiae_C368-T04_good_125.150
SRR6049662Rhizomagastrodiae_C368-T01_good_124.790
SRR6049663Rhizomagastrodiae_C368-T01_good_125.210
SRR6049664Rhizomagastrodiae_C368-T10_good_125.730
SRR6049665Rhizomagastrodiae_C368-T10_good_125.730
SRP279888GastroGastrodia elata tuber 31.79
JuvenJuvenile tuber36.11
Mother_GastroMother tuber of Gastrodia elata 22.30
Mother_JuvenMother tuber of Juvenile 32.99