Gene detail

Detail information of GWHGAAEX008424/evm.TU.scaffold_218.26

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|224368496\|ref\|YP_002602659.1\|	1.00E-61	putative glucosyltransferase family protein [Desulfobacterium autotrophicum HRM2]
nr	gi\|672115356\|ref\|XP_008780554.1\|	0	PREDICTED: glucomannan 4-beta-mannosyltransferase 1-like isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q9LZR3\|CSLA9_ARATH	0	Glucomannan 4-beta-mannosyltransferase 9
trEMBL	tr\|A0A059DFA7\|A0A059DFA7_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW89262.1}
TAIR	AT5G03760	0	Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000213	1008930	1014593	-

Transcript Sequence
>GWHTAAEX008424 GCAGAAGTGAAGTAGCATTTTTTATTTTTTTATTAGATATTTTAAGAAGAATTGAATGCTGAGAAAAAACTGCAGAGCTCAGTTTCATTTGGAGCTCGGTCGTTCTTTAATGGCGCCGAAGTGGTCGGTGATCTTCCGCATTGAGGAGGCCGAATCGACGGCGATGGCGGCTTTGTACCGGAGGAGCAGGGAGATTCGACGGCGGATGATGGTTCCGGCGCTGAATGCCCTGGTTTGGCTCTGCCTGGCTATGTCGGTGATGCTCTTCGTCGAGAAGATGTCCATGGCTGTGGCCGCGCTTTGCGTCAAGATCTACAGGCCTCTGAGGCCGCACCGTGCCTACAGATGGGATCCTCTACCTGCTATTGCCGGTCACCATGACCCGGAACAGCCCCTGCCCTCTTCTTCGCCTTACCCCGTCGTCCTCGTCCAGATTCCCATGTTCAACGAGCGAGAGGTGTATCATCTGTCAATTGGAGCTGTTTGCACGCTGACATGGCCGTCGGATCGGCTAATAATACAAGTTCTTGATGATTCAACAGACAAAGCAACGAGGGATCTGGTGAGAACGGAATGCGAGCGATGGTGGAAGAAGGGGATGAACATACACTACATCTGGAGGGACAACCGGAACGGCTACAAGGCCGGAGCGCTGAGGGAGGCGATGGAGGAGGAGTACGTGAAGGGCTGCGATTACGTCGCCATCTTCGATGCGGACCACCAGCCGCCATCGGATTTCCTGATGCAGACCGCCCCATTCCTGATCAGCAACCCGAGCATAGCTCTGGTCCAAGCCCGCTGGAAGTTCGTGAACGCTGACGACTGCTTGATGACAAGGATACAGGAGATGTCCCTCAACTATCATTTCAGGGTTGAGCAGGAATCGGGCTCTTCCACCATGGCCTTCTTTGGATTCAACGGCACCGCCGGCGTCTGGCGAATCTCCGCCGTCGGCGAAGCCGAGGGATGGAAGGATCGGACGACTGTGGAGGACATGGATCTGGCCATCAGAGCGGCCCTGCAGGGCTGGAAATTCGTCTACGTCGGGGATCTCACCGTCAAGAGCGAGCTGCCCAGCACTTACAAGGCCTACCGCTTTCAGCAGCACCGCTGGGCCTGCGGCCCCGCCAATCTGTTCAGGAAATCCGCCCCCGAGATCTTCGCAGCCAAGAAAGCAGGGTTTTGGAGGAAGATATTTCTGGTGTACAGCTTCTTCCTGGCGAGAAGAATAGTGTCTCATGTGGTGACCTTCTTCTTCTACTGTGTGATCATACCGCTGTCGGCGTTCTTCCCCGAAGTGGAAATCCCCCTGTGGGGTGTGGTTCTCATCCCATCCATTATTACTCTTTTGAATGCTGTAGGAACCCCAAGCTCCATTCATTTGACGCTGGTTTGGATATTTTTCGAGAATGTGATGTCGCTGCACAGATGCAAGGCTGTCTTCATCGGCCTGCTGCAGGCTGGGAGAGTCAATGAATGGATTGTCACTCAGAAGCTGGGCAACATGAAGCCATTCATGCCCCCTTCATCCTCTTCTCTTGCCACCAAATTCCGGGAGAGATTTCATTTTATGGAGATAGGGGTTGGGATATGGCTGATGATATGCGCGTGGCAGGACTTCAACTACAGAAGGGAACAGTACTACATATTCATATTTCCTTCTTCATTGGCATTCATAATCATGGGATGTGGCTATGTTGGAAGATGATGATGATGATGATATGCCCTTATATGAATGCTCGATTTTATTAATTAGGCTGATTTGCGAGATAATTGTATATAATTAAGCCCACAGCTAATTAGAATAATTCTAACTACTGTTCGTTTGGTTATTTTTCAGTTCAACTTAATTTTGCTTTATAAGAAATTATTGTAACAACTTAATTAGCTTCAGTTTTTAATTAAAGATATATAATTAAACCACACAACTAATTTGGGTCTCCATGGATATGGATTGACAAAGAAATTTGAATCTTAAATATGGATCAGTGATGAGGATTCGAGATATTTTCAAGAATGCATATTTAAAAAACCTCATGATCTACTGTTCCCACTGTTTGATAGATGGGTACGATGAATTGGACTGCTTCAGGCTCAACCCTCATCATAAGCAAAGATCGAAGGAAAATGTGCACAAAACCTAAAGCAACTAAAGCTCAAATGCCACAAATGACAAATGTTCTTCCCATCCATAACTCCGGTCGACCTCTATGGATGTGGTGTGCCATCCTCTAAAGGCGAGGAAGATCATGTGTTTGTCTGAGGTCATAGAGGATGGCTCGGTCGAGCTTGGTCTCAATAATGTCTGTAACACAGGGAATGCTAGTGTACGGCCCTTGCGGTTTAACA

Network for GWHGAAEX008424

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13641.5	Glyco_tranf_2_3	123	356	2.00E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.190
SRP064423	SRR2545915	Juvenile tuber	5.890
SRP108465	SRR5643513	five period of Gastrodia elata	17.120
	SRR5643514	five period of Gastrodia elata	12.620
	SRR5643515	five period of Gastrodia elata	9.790
	SRR5643524	five period of Gastrodia elata	15.160
	SRR5643525	five period of Gastrodia elata	2.960
	SRR5643528	five period of Gastrodia elata	1.860
	SRR5643658	five period of Gastrodia elata	2.300
	SRR5643659	five period of Gastrodia elata	1.240
	SRR5643660	five period of Gastrodia elata	1.000
	SRR5643661	five period of Gastrodia elata	1.430
	SRR5643662	five period of Gastrodia elata	1.730
	SRR5643663	five period of Gastrodia elata	1.500
	SRR5643664	five period of Gastrodia elata	0.460
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.950
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.580
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.110
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.830
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.670
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.670
SRP279888	Gastro	Gastrodia elata tuber	0.80
	Juven	Juvenile tuber	16.97
	Mother_Gastro	Mother tuber of Gastrodia elata	4.27
	Mother_Juven	Mother tuber of Juvenile	8.80