Detail information of GWHGAAEX008431/evm.TU.scaffold_219.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743838312|ref|XP_010936666.1|1.75E-37PREDICTED: ocs element-binding factor 1-like [Elaeis guineensis]
Swissprottr|P24068|OCS1_MAIZE6.00E-17Ocs element-binding factor 1
trEMBLtr|A5C759|A5C759_VITVI2.00E-30Putative uncharacterized protein {ECO:0000313|EMBL:CAN73127.1}
TAIRAT1G753901.00E-25basic leucine-zipper 44

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000224125571127130-
Transcript Sequence

Network for GWHGAAEX008431

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07716.14bZIP_23390.00018
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.280
SRR2545915Juvenile tuber0.290
SRP108465SRR5643513five period of Gastrodia elata1.220
SRR5643514five period of Gastrodia elata1.390
SRR5643515five period of Gastrodia elata0.850
SRR5643524five period of Gastrodia elata0.490
SRR5643525five period of Gastrodia elata50.970
SRR5643528five period of Gastrodia elata51.890
SRR5643658five period of Gastrodia elata26.530
SRR5643659five period of Gastrodia elata0.240
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.540
SRR5643662five period of Gastrodia elata1.380
SRR5643663five period of Gastrodia elata1.240
SRR5643664five period of Gastrodia elata1.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.670
SRR6049655Rhizomagastrodiae_C368-T10_good_14.200
SRR6049656Rhizomagastrodiae_C368-T07_good_14.490
SRR6049657Rhizomagastrodiae_C368-T07_good_14.270
SRR6049658Rhizomagastrodiae_C368-T04_good_11.830
SRR6049659Rhizomagastrodiae_C368-T04_good_13.230
SRR6049660Rhizomagastrodiae_C368-T01_good_12.440
SRR6049661Rhizomagastrodiae_C368-T04_good_11.660
SRR6049662Rhizomagastrodiae_C368-T01_good_17.270
SRR6049663Rhizomagastrodiae_C368-T01_good_14.670
SRR6049664Rhizomagastrodiae_C368-T10_good_18.120
SRR6049665Rhizomagastrodiae_C368-T10_good_18.120
SRP279888GastroGastrodia elata tuber 3.78
JuvenJuvenile tuber0.21
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00