Detail information of GWHGAAEX008432/evm.TU.scaffold_219.4
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|336177049|ref|YP_004582424.1| | 2.00E-23 | serine/threonine protein kinase [Frankia symbiont of Datisca glomerata] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|475653395|gb|AGI60282.1| | 0 | mitogen-activated protein kinase 3 [Dendrobium catenatum] |
| Swissprot | tr|Q6Z437|MPK3_ORYSJ | 0 | Mitogen-activated protein kinase 3 |
| trEMBL | tr|C5XUN0|C5XUN0_SORBI | 0 | Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165} |
| TAIR | AT1G10210 | 0 | mitogen-activated protein kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000224 | 232286 | 281430 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008432
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 33 | 318 | 1.10E-69 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20535 | MPK1_2 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 37.930 |
| SRR2545915 | Juvenile tuber | 35.310 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 19.130 |
| SRR5643514 | five period of Gastrodia elata | 23.800 | |
| SRR5643515 | five period of Gastrodia elata | 20.540 | |
| SRR5643524 | five period of Gastrodia elata | 19.180 | |
| SRR5643525 | five period of Gastrodia elata | 41.130 | |
| SRR5643528 | five period of Gastrodia elata | 34.920 | |
| SRR5643658 | five period of Gastrodia elata | 46.730 | |
| SRR5643659 | five period of Gastrodia elata | 20.790 | |
| SRR5643660 | five period of Gastrodia elata | 23.910 | |
| SRR5643661 | five period of Gastrodia elata | 17.110 | |
| SRR5643662 | five period of Gastrodia elata | 17.890 | |
| SRR5643663 | five period of Gastrodia elata | 24.520 | |
| SRR5643664 | five period of Gastrodia elata | 23.900 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 34.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 33.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 32.500 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 37.400 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 39.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 42.720 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 38.600 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 34.820 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 22.700 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 28.430 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.670 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.670 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 27.04 |
| Juven | Juvenile tuber | 25.65 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 13.10 | |
| Mother_Juven | Mother tuber of Juvenile | 11.63 |