Detail information of GWHGAAEX008435/evm.TU.scaffold_219.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|337289095|ref|YP_004628567.1|8.00E-24tyrosine/nicotianamine aminotransferase [Thermodesulfobacterium geofontis OPF15]
KOGKOG02591.00E-31Tyrosine aminotransferase
nrgi|695012947|ref|XP_009393246.1|4.29E-45PREDICTED: probable aminotransferase TAT2 isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ST02|NAATA_HORVU3.00E-35Nicotianamine aminotransferase A {ECO:0000312|EMBL:BAA87052.2}
trEMBLtr|M0SH95|M0SH95_MUSAM5.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P23790_001}
TAIRAT2G206101.00E-31Tyrosine transaminase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000224350994376127+
Transcript Sequence

Network for GWHGAAEX008435

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.20Aminotran_1_2461872.80E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00815TAT Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Biosynthesis of amino acidsmap01230
Cysteine and methionine metabolismmap00270
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Isoquinoline alkaloid biosynthesismap00950
Novobiocin biosynthesismap00401

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0030170Molecular Functionpyridoxal phosphate binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata1.070
SRR5643514five period of Gastrodia elata1.100
SRR5643515five period of Gastrodia elata0.750
SRR5643524five period of Gastrodia elata1.320
SRR5643525five period of Gastrodia elata0.270
SRR5643528five period of Gastrodia elata0.410
SRR5643658five period of Gastrodia elata1.730
SRR5643659five period of Gastrodia elata0.110
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.120
SRR5643663five period of Gastrodia elata0.090
SRR5643664five period of Gastrodia elata0.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.360
SRR6049655Rhizomagastrodiae_C368-T10_good_12.700
SRR6049656Rhizomagastrodiae_C368-T07_good_12.580
SRR6049657Rhizomagastrodiae_C368-T07_good_10.470
SRR6049658Rhizomagastrodiae_C368-T04_good_11.190
SRR6049659Rhizomagastrodiae_C368-T04_good_11.820
SRR6049660Rhizomagastrodiae_C368-T01_good_11.250
SRR6049661Rhizomagastrodiae_C368-T04_good_10.510
SRR6049662Rhizomagastrodiae_C368-T01_good_12.110
SRR6049663Rhizomagastrodiae_C368-T01_good_10.850
SRR6049664Rhizomagastrodiae_C368-T10_good_11.890
SRR6049665Rhizomagastrodiae_C368-T10_good_11.890
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.54
Mother_GastroMother tuber of Gastrodia elata 1.86
Mother_JuvenMother tuber of Juvenile 0.72