Detail information of GWHGAAEX008447/evm.TU.scaffold_219.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|435850904|ref|YP_007312490.1|8.00E-22putative ATPase (AAA+ superfamily) [Methanomethylovorans hollandica DSM 15978]
KOGKOG07420AAA+-type ATPase
nrgi|672144075|ref|XP_008795930.1|0PREDICTED: ATPase family AAA domain-containing protein 3-like [Phoenix dactylifera]
Swissprottr|Q9SCN8|CD48D_ARATH2.00E-19Cell division control protein 48 homolog D
trEMBLtr|M0RJX3|M0RJX3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P20480_001}
TAIRAT2G18330_20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000224642296653216+
Transcript Sequence

Network for GWHGAAEX008447

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12037.7DUF3523523186.90E-99
PF00004.28AAA3825092.20E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.480
SRR2545915Juvenile tuber9.630
SRP108465SRR5643513five period of Gastrodia elata12.640
SRR5643514five period of Gastrodia elata10.710
SRR5643515five period of Gastrodia elata11.870
SRR5643524five period of Gastrodia elata12.330
SRR5643525five period of Gastrodia elata7.950
SRR5643528five period of Gastrodia elata6.500
SRR5643658five period of Gastrodia elata9.230
SRR5643659five period of Gastrodia elata17.000
SRR5643660five period of Gastrodia elata18.450
SRR5643661five period of Gastrodia elata19.730
SRR5643662five period of Gastrodia elata20.300
SRR5643663five period of Gastrodia elata18.380
SRR5643664five period of Gastrodia elata22.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.550
SRR6049655Rhizomagastrodiae_C368-T10_good_115.300
SRR6049656Rhizomagastrodiae_C368-T07_good_118.150
SRR6049657Rhizomagastrodiae_C368-T07_good_115.010
SRR6049658Rhizomagastrodiae_C368-T04_good_115.550
SRR6049659Rhizomagastrodiae_C368-T04_good_116.190
SRR6049660Rhizomagastrodiae_C368-T01_good_117.830
SRR6049661Rhizomagastrodiae_C368-T04_good_116.030
SRR6049662Rhizomagastrodiae_C368-T01_good_119.310
SRR6049663Rhizomagastrodiae_C368-T01_good_117.620
SRR6049664Rhizomagastrodiae_C368-T10_good_117.340
SRR6049665Rhizomagastrodiae_C368-T10_good_117.340
SRP279888GastroGastrodia elata tuber 23.19
JuvenJuvenile tuber22.74
Mother_GastroMother tuber of Gastrodia elata 28.24
Mother_JuvenMother tuber of Juvenile 31.08