Detail information of GWHGAAEX008449/evm.TU.scaffold_219.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30245.00E-122Uncharacterized conserved protein
nrgi|743842986|ref|XP_010937947.1|1.83E-161PREDICTED: Golgi to ER traffic protein 4 homolog [Elaeis guineensis]
trEMBLtr|A0A068VEQ3|A0A068VEQ3_COFCA2.00E-154Coffea canephora
TAIRAT5G632205.00E-122Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000224661439715645+
Transcript Sequence

Network for GWHGAAEX008449

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04190.12DUF410603321.30E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045048Biological Processprotein insertion into ER membrane
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms207.240
SRR2545915Juvenile tuber234.150
SRP108465SRR5643513five period of Gastrodia elata90.260
SRR5643514five period of Gastrodia elata78.780
SRR5643515five period of Gastrodia elata87.120
SRR5643524five period of Gastrodia elata79.190
SRR5643525five period of Gastrodia elata53.030
SRR5643528five period of Gastrodia elata47.000
SRR5643658five period of Gastrodia elata45.590
SRR5643659five period of Gastrodia elata146.250
SRR5643660five period of Gastrodia elata173.620
SRR5643661five period of Gastrodia elata135.990
SRR5643662five period of Gastrodia elata173.100
SRR5643663five period of Gastrodia elata186.400
SRR5643664five period of Gastrodia elata180.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1120.650
SRR6049655Rhizomagastrodiae_C368-T10_good_168.150
SRR6049656Rhizomagastrodiae_C368-T07_good_190.540
SRR6049657Rhizomagastrodiae_C368-T07_good_1134.030
SRR6049658Rhizomagastrodiae_C368-T04_good_1148.390
SRR6049659Rhizomagastrodiae_C368-T04_good_1179.890
SRR6049660Rhizomagastrodiae_C368-T01_good_1121.100
SRR6049661Rhizomagastrodiae_C368-T04_good_1128.930
SRR6049662Rhizomagastrodiae_C368-T01_good_187.640
SRR6049663Rhizomagastrodiae_C368-T01_good_1111.110
SRR6049664Rhizomagastrodiae_C368-T10_good_190.390
SRR6049665Rhizomagastrodiae_C368-T10_good_190.390
SRP279888GastroGastrodia elata tuber 195.12
JuvenJuvenile tuber82.74
Mother_GastroMother tuber of Gastrodia elata 49.74
Mother_JuvenMother tuber of Juvenile 51.55