Gene detail

Detail information of GWHGAAEX008458/evm.TU.scaffold_219.31_evm.TU.scaffold_219.32

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2629	4.00E-98	Peroxisomal membrane anchor protein (peroxin)
nr	gi\|743838541\|ref\|XP_010936731.1\|	2.83E-136	PREDICTED: peroxisomal membrane protein PEX14-like [Elaeis guineensis]
Swissprot	tr\|Q9FXT6\|PEX14_ARATH	2.00E-100	Peroxisomal membrane protein PEX14
trEMBL	tr\|B9RB25\|B9RB25_RICCO	4.00E-119	Putative uncharacterized protein {ECO:0000313\|EMBL:EEF52002.1}
TAIR	AT5G62810_2	4.00E-98	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000224	948394	967446	-

Transcript Sequence
>GWHTAAEX008458 AGATGCACTCGTAAATTTTTCAATCTTAAGCCCTATTTCTCCGCCGGTTGCTCGCACTTAGGGCTTCTTCGAAGCTTCGGTCATCCCTTCGCTGCTCGTTTCAGAGGCATTTTCTCCGCCGGTCGCTCGCGCTTAGGGCATCTTCGAAGCTTCGATCGTCGCATTCACCGTTGTTCGGCTTACAACAAATTAATAAGTGCTGCCTTTACACCACTGTAGCGTATAGAGATGGAAGGCAGTCGCATGCGTACAGAGATGGACGGTAGTCGCATGCGGACAGTCCCAATGAGACTACCTACGAATATCATTTCTCTCTCGCACTGAGACGGAGCTGGACTTCTGTGCTCATTGCAGACTCCCTAGAAGAGAGGAAGACAAAGATAAGAAGAGAGGAAGACAAAGATAATAAGAGAGAGATTGAGAAAGATAGGTGGTGCGGATGGCCACACAGGGAGGCGGTGACGAGAAACTCATGACCAAAGGGCCTGAATCATCACAAGCTACGGGTGGAATTGTAGAGAGTGCGCTCAATGATGAATATCAACAAAAATTACCATTTATAACACTGGAACCATTACGTGAAGATCAAGTGCAAAATGCTGTGAAGTTTCTTTCGCATCCTAAAGTAAGGGGTTCACCTGTCATTTATAGGCGCTCTTTTTTAGAGAGGAAAGGCTTGACAAAAGAGGAAATTGATGAAGCATTTCGGCTTGTACCTGATCCACCTGCCAATGCCACAACCGCTGAAACTCTTGCAACAAGTCAGGCTACTCAGCCAAGAACGTCTACCAGCTTGTATCCTCAAGCTCCCATTCAACTTCCCCCTTCTGCAACTGCTCAAGCTGGTGTTGTTTCCTTGGCTCCAATGTCTCAACAACCTAGATTCAGATGGTCCCATGCTTTACTTGCTATTGGAGTGTTATCAGCCTCTGGAGCTGGATCTGCTTTATTCTTTAAGAAAGTGGTTCTTCCTCGTTTTAAAGCTTGGATAAGAAGGGTAGCAGTGGAAGATACTCTCTCTGTTAAGGAAGATACTCTCTCTGTAAAGGAAGATACGGCAAATAAAAGCCTAGCTGAAGAAACGGTAGAAGCTGCTAAAGCAGCTGCCTCAGCTGCTGCCATTGTTGCTACAGCAAGTCAAGAATTATTAAATTCAAAAAATGAAGATCGGAAATATTTTGAGGCTTTCATGGGAATGATAGATGTACAAGTTAAGGAAATGAAATCCATGACTGAAGCTATTCATAAATTGGAAAAGGTCAGGGAGCAAGACAAGCTGATAGATGAGTATTTTCAGTATGCCACGGCAAATGGTTCTAGCAATAGCCCATGGGGAACTCCGCAGGTCAACCAAACTGCTGCAATCCCAAACTATTTGCAGCAGGCTAAAGTTAATGACACACTAAACACCAGTTATGGATCAGGGCAGTCTGTAGCCACTCCTGTGGAACCGACAACTGCTTTCCACCCAAAGTCATATATGGAGATCATGGCTATGGTTCAGAGAGGAGAGAAGCCACCAAACATAAAGGAGATCAATGATGCTCCTCCAAACCCTAATCAGCCCCCATCAAAACCACTTGTAGCTCCAAAGACAAAGCCATGGGAGATTCCTCAGCAAAACCCGATCACCCTTCTACCACAGGAGTATGACCAATTGTCGGAGCCTTGGTGGAGAAAGAAATCCGTCAAAATTACTGAACTGGAGCCCAACGGCGCCCCCGCGAATGAGATGCCACAGGCCCAAAGGGTGTGGGTCCCGCCCCAGCCTCCGTCCGTCGCCATACCAGAGGCTGCGGCTGCCATCAGGCACCCGAAGTCTTCACCGGCCGTTCAAGAGAAGCACTCTTCCGACGAGAGTGCGGCGATGGAAATTCCCCGTGAGGGCGACGGAGCCGTCACCGTCGGCACGTTGAGCTCTGGGAGGGATTCAGATTCCTCGAGCGCCGCCGCCCCTTCTGCCGCCGTCCATCGACCGAGCGAAATCGAGGAAGAGAGAGACTATGGTGTTGAGGTTGTACTTTAAACCAAGTTCTTTAGGACTGCATTTATTCTATATATAGGGATTTGTGATATGTATGTATTATATAAAGTAGTATGTAAAATCTTATAAAATTGTTGGCAGATCTGAGAATTTATAGCCCAACCAATAATCAGCTCAAAAAATGTTGTCTTAGCTTATTGTGTAATATAGAGATTTTAATCATGATTATGCTTAAAGACAGCTTAAAAAACACTTTATGTACTGGAATGGCTTTTGTTGGGCTATTAAGCAGATTTCTGTTTTCTTCTTCTTATATTTAAGATAATAATATTGCCAGCATGTTAGGTCA

Network for GWHGAAEX008458

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04695.12	Pex14_N	47	179	8.90E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K13343	PEX14	Peroxisome	map04146

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	100.630
SRP064423	SRR2545915	Juvenile tuber	105.780
SRP108465	SRR5643513	five period of Gastrodia elata	71.990
	SRR5643514	five period of Gastrodia elata	61.890
	SRR5643515	five period of Gastrodia elata	59.210
	SRR5643524	five period of Gastrodia elata	62.350
	SRR5643525	five period of Gastrodia elata	73.070
	SRR5643528	five period of Gastrodia elata	64.010
	SRR5643658	five period of Gastrodia elata	74.960
	SRR5643659	five period of Gastrodia elata	103.710
	SRR5643660	five period of Gastrodia elata	143.700
	SRR5643661	five period of Gastrodia elata	122.520
	SRR5643662	five period of Gastrodia elata	144.610
	SRR5643663	five period of Gastrodia elata	134.450
	SRR5643664	five period of Gastrodia elata	157.100
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	79.240
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	96.240
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	69.200
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	92.390
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	83.130
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	91.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	80.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	83.580
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	69.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	68.870
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	71.700
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	71.700
SRP279888	Gastro	Gastrodia elata tuber	100.61
	Juven	Juvenile tuber	117.47
	Mother_Gastro	Mother tuber of Gastrodia elata	76.27
	Mother_Juven	Mother tuber of Juvenile	85.42