Detail information of GWHGAAEX008459/evm.TU.scaffold_219.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|307151984|ref|YP_003887368.1|3.00E-28hypothetical protein Cyan7822_2113 [Cyanothece sp. PCC 7822]
KOGKOG18400Kinesin light chain
nrgi|743838553|ref|XP_010936735.1|0PREDICTED: uncharacterized protein LOC105056290 [Elaeis guineensis]
trEMBLtr|J3LGC0|J3LGC0_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G36870.1}
TAIRAT3G279600Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000224970059975919-
Transcript Sequence

Network for GWHGAAEX008459

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13424.5TPR_122102751.20E-07
PF13424.5TPR_123874606.00E-13
PF13424.5TPR_125586298.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.320
SRR2545915Juvenile tuber21.370
SRP108465SRR5643513five period of Gastrodia elata30.420
SRR5643514five period of Gastrodia elata29.920
SRR5643515five period of Gastrodia elata36.080
SRR5643524five period of Gastrodia elata30.230
SRR5643525five period of Gastrodia elata41.470
SRR5643528five period of Gastrodia elata40.440
SRR5643658five period of Gastrodia elata54.960
SRR5643659five period of Gastrodia elata44.720
SRR5643660five period of Gastrodia elata29.340
SRR5643661five period of Gastrodia elata34.460
SRR5643662five period of Gastrodia elata34.750
SRR5643663five period of Gastrodia elata38.070
SRR5643664five period of Gastrodia elata27.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.300
SRR6049655Rhizomagastrodiae_C368-T10_good_126.400
SRR6049656Rhizomagastrodiae_C368-T07_good_127.720
SRR6049657Rhizomagastrodiae_C368-T07_good_123.800
SRR6049658Rhizomagastrodiae_C368-T04_good_124.080
SRR6049659Rhizomagastrodiae_C368-T04_good_124.890
SRR6049660Rhizomagastrodiae_C368-T01_good_123.510
SRR6049661Rhizomagastrodiae_C368-T04_good_125.120
SRR6049662Rhizomagastrodiae_C368-T01_good_130.370
SRR6049663Rhizomagastrodiae_C368-T01_good_128.360
SRR6049664Rhizomagastrodiae_C368-T10_good_129.850
SRR6049665Rhizomagastrodiae_C368-T10_good_129.850
SRP279888GastroGastrodia elata tuber 30.82
JuvenJuvenile tuber18.08
Mother_GastroMother tuber of Gastrodia elata 41.19
Mother_JuvenMother tuber of Juvenile 22.29