Detail information of GWHGAAEX008463/evm.TU.scaffold_219.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07794.00E-86Protease, Ulp1 family
nrgi|672118447|ref|XP_008782433.1|7.14E-150PREDICTED: ubiquitin-like-specific protease 1D isoform X2 [Phoenix dactylifera]
Swissprottr|Q2PS26|ULP1D_ARATH1.00E-87Ubiquitin-like-specific protease 1D
trEMBLtr|M0T3S1|M0T3S1_MUSAM3.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P03230_001}
TAIRAT1G602204.00E-86UB-like protease 1D

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000022410274601058689-
Transcript Sequence

Network for GWHGAAEX008463

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02902.18Peptidase_C483025036.20E-39
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyULP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.860
SRR2545915Juvenile tuber20.710
SRP108465SRR5643513five period of Gastrodia elata16.040
SRR5643514five period of Gastrodia elata14.120
SRR5643515five period of Gastrodia elata13.390
SRR5643524five period of Gastrodia elata14.880
SRR5643525five period of Gastrodia elata7.550
SRR5643528five period of Gastrodia elata6.610
SRR5643658five period of Gastrodia elata9.920
SRR5643659five period of Gastrodia elata11.090
SRR5643660five period of Gastrodia elata10.110
SRR5643661five period of Gastrodia elata9.210
SRR5643662five period of Gastrodia elata9.260
SRR5643663five period of Gastrodia elata10.750
SRR5643664five period of Gastrodia elata9.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.890
SRR6049655Rhizomagastrodiae_C368-T10_good_110.990
SRR6049656Rhizomagastrodiae_C368-T07_good_114.870
SRR6049657Rhizomagastrodiae_C368-T07_good_119.370
SRR6049658Rhizomagastrodiae_C368-T04_good_115.630
SRR6049659Rhizomagastrodiae_C368-T04_good_118.600
SRR6049660Rhizomagastrodiae_C368-T01_good_115.010
SRR6049661Rhizomagastrodiae_C368-T04_good_114.890
SRR6049662Rhizomagastrodiae_C368-T01_good_114.110
SRR6049663Rhizomagastrodiae_C368-T01_good_115.140
SRR6049664Rhizomagastrodiae_C368-T10_good_115.340
SRR6049665Rhizomagastrodiae_C368-T10_good_115.340
SRP279888GastroGastrodia elata tuber 16.03
JuvenJuvenile tuber23.08
Mother_GastroMother tuber of Gastrodia elata 19.05
Mother_JuvenMother tuber of Juvenile 19.78