Detail information of GWHGAAEX008467/evm.TU.scaffold_22.1
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332666557|ref|YP_004449345.1| | 3.00E-69 | beta-galactosidase [Haliscomenobacter hydrossis DSM 1100] |
| KOG | KOG0626 | 3.00E-109 | Beta-glucosidase, lactase phlorizinhydrolase, and related proteins |
| nr | gi|743784536|ref|XP_010921682.1| | 2.05E-132 | PREDICTED: beta-glucosidase 22-like [Elaeis guineensis] |
| Swissprot | tr|Q60DX8|BGL22_ORYSJ | 5.00E-114 | Beta-glucosidase 22 (Precursor) |
| trEMBL | tr|I7GSQ8|I7GSQ8_AGAAF | 1.00E-127 | Acyl-glucose-dependent anthocyanin 7-O-glucosyltransferase {ECO:0000313|EMBL:BAM29304.1} |
| TAIR | AT1G02850 | 3.00E-109 | beta glucosidase 11 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000017 | 7479 | 10089 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008467
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00232.17 | Glyco_hydro_1 | 4 | 295 | 3.80E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.470 |
| SRR2545915 | Juvenile tuber | 54.260 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.480 |
| SRR5643514 | five period of Gastrodia elata | 23.660 | |
| SRR5643515 | five period of Gastrodia elata | 20.390 | |
| SRR5643524 | five period of Gastrodia elata | 18.280 | |
| SRR5643525 | five period of Gastrodia elata | 26.080 | |
| SRR5643528 | five period of Gastrodia elata | 22.800 | |
| SRR5643658 | five period of Gastrodia elata | 23.940 | |
| SRR5643659 | five period of Gastrodia elata | 20.650 | |
| SRR5643660 | five period of Gastrodia elata | 22.390 | |
| SRR5643661 | five period of Gastrodia elata | 21.610 | |
| SRR5643662 | five period of Gastrodia elata | 23.100 | |
| SRR5643663 | five period of Gastrodia elata | 28.210 | |
| SRR5643664 | five period of Gastrodia elata | 20.040 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.840 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 23.620 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 18.130 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 21.170 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.460 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 23.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 32.690 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 34.450 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 26.970 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 17.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 17.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.24 |
| Juven | Juvenile tuber | 18.76 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.54 | |
| Mother_Juven | Mother tuber of Juvenile | 13.48 |