Detail information of GWHGAAEX008468/evm.TU.scaffold_22.2
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|271967832|ref|YP_003342028.1| | 4.00E-17 | beta-glucosidase [Streptosporangium roseum DSM 43021] |
| KOG | KOG0626 | 2.00E-26 | Beta-glucosidase, lactase phlorizinhydrolase, and related proteins |
| nr | gi|743784536|ref|XP_010921682.1| | 2.02E-33 | PREDICTED: beta-glucosidase 22-like [Elaeis guineensis] |
| Swissprot | tr|Q60DX8|BGL22_ORYSJ | 2.00E-28 | Beta-glucosidase 22 (Precursor) |
| trEMBL | tr|I7GSQ8|I7GSQ8_AGAAF | 6.00E-31 | Acyl-glucose-dependent anthocyanin 7-O-glucosyltransferase {ECO:0000313|EMBL:BAM29304.1} |
| TAIR | AT4G27820 | 2.00E-26 | beta glucosidase 9 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000017 | 10207 | 11344 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008468
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00232.17 | Glyco_hydro_1 | 34 | 132 | 9.70E-28 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.550 |
| SRR2545915 | Juvenile tuber | 55.900 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.930 |
| SRR5643514 | five period of Gastrodia elata | 26.570 | |
| SRR5643515 | five period of Gastrodia elata | 25.420 | |
| SRR5643524 | five period of Gastrodia elata | 29.460 | |
| SRR5643525 | five period of Gastrodia elata | 28.540 | |
| SRR5643528 | five period of Gastrodia elata | 36.520 | |
| SRR5643658 | five period of Gastrodia elata | 33.790 | |
| SRR5643659 | five period of Gastrodia elata | 22.920 | |
| SRR5643660 | five period of Gastrodia elata | 24.100 | |
| SRR5643661 | five period of Gastrodia elata | 34.150 | |
| SRR5643662 | five period of Gastrodia elata | 31.150 | |
| SRR5643663 | five period of Gastrodia elata | 40.690 | |
| SRR5643664 | five period of Gastrodia elata | 31.050 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 30.160 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.500 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 28.850 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.180 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 32.920 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 20.780 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 30.040 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 43.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 45.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 36.990 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.960 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.960 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 25.18 |
| Juven | Juvenile tuber | 11.75 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.90 | |
| Mother_Juven | Mother tuber of Juvenile | 9.59 |