Detail information of GWHGAAEX008469/evm.TU.scaffold_22.4_evm.TU.scaffold_22.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07781.00E-88Protease, Ulp1 family
nrgi|672162553|ref|XP_008801096.1|1.53E-112PREDICTED: ubiquitin-like-specific protease ESD4 [Phoenix dactylifera]
Swissprottr|Q8GYL3|ULP1A_ARATH1.00E-88Ubiquitin-like-specific protease 1A
trEMBLtr|M0TN68|M0TN68_MUSAM2.00E-106Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P06650_001}
TAIRAT3G069101.00E-88UB-like protease 1A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001796572137883-
Transcript Sequence

Network for GWHGAAEX008469

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02902.18Peptidase_C481283101.00E-39
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyULP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.540
SRR2545915Juvenile tuber14.030
SRP108465SRR5643513five period of Gastrodia elata40.530
SRR5643514five period of Gastrodia elata45.030
SRR5643515five period of Gastrodia elata35.280
SRR5643524five period of Gastrodia elata42.610
SRR5643525five period of Gastrodia elata37.490
SRR5643528five period of Gastrodia elata34.460
SRR5643658five period of Gastrodia elata42.760
SRR5643659five period of Gastrodia elata28.730
SRR5643660five period of Gastrodia elata30.160
SRR5643661five period of Gastrodia elata23.730
SRR5643662five period of Gastrodia elata23.690
SRR5643663five period of Gastrodia elata31.940
SRR5643664five period of Gastrodia elata25.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.420
SRR6049655Rhizomagastrodiae_C368-T10_good_135.830
SRR6049656Rhizomagastrodiae_C368-T07_good_129.030
SRR6049657Rhizomagastrodiae_C368-T07_good_131.170
SRR6049658Rhizomagastrodiae_C368-T04_good_118.150
SRR6049659Rhizomagastrodiae_C368-T04_good_115.430
SRR6049660Rhizomagastrodiae_C368-T01_good_123.910
SRR6049661Rhizomagastrodiae_C368-T04_good_120.470
SRR6049662Rhizomagastrodiae_C368-T01_good_121.750
SRR6049663Rhizomagastrodiae_C368-T01_good_119.510
SRR6049664Rhizomagastrodiae_C368-T10_good_129.290
SRR6049665Rhizomagastrodiae_C368-T10_good_129.290
SRP279888GastroGastrodia elata tuber 34.81
JuvenJuvenile tuber81.46
Mother_GastroMother tuber of Gastrodia elata 28.62
Mother_JuvenMother tuber of Juvenile 62.35