Detail information of GWHGAAEX008478/evm.TU.scaffold_22.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|332666557|ref|YP_004449345.1|2.00E-117beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
KOGKOG06260Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
nrgi|743784536|ref|XP_010921682.1|0PREDICTED: beta-glucosidase 22-like [Elaeis guineensis]
Swissprottr|Q60DX8|BGL22_ORYSJ0Beta-glucosidase 22 (Precursor)
trEMBLtr|I7GSQ8|I7GSQ8_AGAAF0Acyl-glucose-dependent anthocyanin 7-O-glucosyltransferase {ECO:0000313|EMBL:BAM29304.1}
TAIRAT1G028500beta glucosidase 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001719017891919215-
Transcript Sequence

Network for GWHGAAEX008478

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00232.17Glyco_hydro_1334971.90E-138
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1
Carbohydrate-Active enzymes FamilyGH1
Carbohydrate-Active enzymes FamilyGH1
Carbohydrate-Active enzymes FamilyGH1
Carbohydrate-Active enzymes FamilyGH1
Carbohydrate-Active enzymes FamilyGH1

KEGG pathway

KO Enzyme pathway mapID
K01188E3.2.1.21 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.830
SRR2545915Juvenile tuber28.460
SRP108465SRR5643513five period of Gastrodia elata16.730
SRR5643514five period of Gastrodia elata18.270
SRR5643515five period of Gastrodia elata16.240
SRR5643524five period of Gastrodia elata16.900
SRR5643525five period of Gastrodia elata20.470
SRR5643528five period of Gastrodia elata15.550
SRR5643658five period of Gastrodia elata20.110
SRR5643659five period of Gastrodia elata16.840
SRR5643660five period of Gastrodia elata18.900
SRR5643661five period of Gastrodia elata19.300
SRR5643662five period of Gastrodia elata21.580
SRR5643663five period of Gastrodia elata28.110
SRR5643664five period of Gastrodia elata18.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.130
SRR6049655Rhizomagastrodiae_C368-T10_good_112.730
SRR6049656Rhizomagastrodiae_C368-T07_good_116.570
SRR6049657Rhizomagastrodiae_C368-T07_good_115.880
SRR6049658Rhizomagastrodiae_C368-T04_good_114.730
SRR6049659Rhizomagastrodiae_C368-T04_good_112.920
SRR6049660Rhizomagastrodiae_C368-T01_good_115.410
SRR6049661Rhizomagastrodiae_C368-T04_good_118.430
SRR6049662Rhizomagastrodiae_C368-T01_good_120.930
SRR6049663Rhizomagastrodiae_C368-T01_good_117.510
SRR6049664Rhizomagastrodiae_C368-T10_good_114.190
SRR6049665Rhizomagastrodiae_C368-T10_good_114.190
SRP279888GastroGastrodia elata tuber 24.66
JuvenJuvenile tuber13.80
Mother_GastroMother tuber of Gastrodia elata 9.48
Mother_JuvenMother tuber of Juvenile 10.07