Detail information of GWHGAAEX008481/evm.TU.scaffold_22.35
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332666557|ref|YP_004449345.1| | 9.00E-69 | beta-galactosidase [Haliscomenobacter hydrossis DSM 1100] |
| KOG | KOG0626 | 3.00E-112 | Beta-glucosidase, lactase phlorizinhydrolase, and related proteins |
| nr | gi|743844634|ref|XP_010938394.1| | 6.46E-133 | PREDICTED: beta-glucosidase 22-like [Elaeis guineensis] |
| Swissprot | tr|Q60DX8|BGL22_ORYSJ | 1.00E-125 | Beta-glucosidase 22 (Precursor) |
| trEMBL | tr|K3Z5D5|K3Z5D5_SETIT | 4.00E-128 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si021753m} |
| TAIR | AT1G02850 | 3.00E-112 | beta glucosidase 11 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000017 | 2117145 | 2141928 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008481
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00232.17 | Glyco_hydro_1 | 31 | 290 | 7.00E-89 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.380 |
| SRR2545915 | Juvenile tuber | 4.650 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.380 |
| SRR5643514 | five period of Gastrodia elata | 5.990 | |
| SRR5643515 | five period of Gastrodia elata | 17.110 | |
| SRR5643524 | five period of Gastrodia elata | 12.590 | |
| SRR5643525 | five period of Gastrodia elata | 2.680 | |
| SRR5643528 | five period of Gastrodia elata | 9.790 | |
| SRR5643658 | five period of Gastrodia elata | 3.350 | |
| SRR5643659 | five period of Gastrodia elata | 9.590 | |
| SRR5643660 | five period of Gastrodia elata | 6.400 | |
| SRR5643661 | five period of Gastrodia elata | 8.850 | |
| SRR5643662 | five period of Gastrodia elata | 10.170 | |
| SRR5643663 | five period of Gastrodia elata | 12.300 | |
| SRR5643664 | five period of Gastrodia elata | 2.150 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.230 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.360 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.210 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 12.810 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.770 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.450 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.910 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 28.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 20.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.740 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.740 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 11.09 |
| Juven | Juvenile tuber | 3.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.87 | |
| Mother_Juven | Mother tuber of Juvenile | 17.03 |