Gene detail

Detail information of GWHGAAEX008493/evm.TU.scaffold_22.57

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695052278\|ref\|XP_009414193.1\|	0	PREDICTED: uncharacterized protein LOC103995350 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TSJ5\|M0TSJ5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P21920_001}
TAIR	AT3G62900	1.00E-65	CW-type Zinc Finger

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000017	3599791	3636841	-

Transcript Sequence
>GWHTAAEX008493 CTGAGTTTTCTCTTTGGAAGGAGGAGGAAGAGGCAGGGGGAGAACTGGAGGGAGAGGAAAACGACAATCACGACGTTGAAAAACTTTGTGAGAATCTAGGGTTCCTGCGGATCGGGCAACGATCGTTGCATCTTGCTGCTGCGGGGCGCGATTAGCTGCGAATTGTGGTTTCTGTGAGGCTGTTGGCGGTTGGTGAGGTGAATTTGTGGGTAACGGCTTGTTCGGTGGACTTTGATCGAGCGGATGCTTTCTGTGGGGAGTAGTAATGAGGGGATGAAGCGTCCGGTGTTAGGGTTGGAAGGAAAGGGTAGTGAAAGAAGAAGGGATATGGAGGAGAACGATCTCGAGGAAGGAGAAGCGTTCTTCGGGCAGGATGACGACATCGACCCGGATGCTCTTTCTTACATCGATGAAAAGCTTCAACATGTTTTGGGGCACTTCCAAAAAGAGTTTGAAGGTGGCGTGTCAGCAGAAACCTTGGGATCCAAGTTTGGGGGATATGGCTCTTTTCTGCCGGCATACCAGCGCTCTCCTCCAGTTTTGTTGTCAGAACCTAAGAGCCCTGCCAAAGTGCCAGGCCACAGCCTATCGAGGTCACCTTACAGTTTGCAACATGAGAATCCTTCTGTTCTTGCAAATGCATCTATTGGTAAGTCCAACATTGCACCTGCAGTGCAGCTATCTGAGAAATTAAGTCAAAAGGACACTTTCATTACCTCAAGCAGTACTGAAGATATTACACAGCACGAGCCTTCGAGACCGACACAGGATAGTAGAGATCCCAAGTCGCTGAAGGTGCGCATTAAGGTTGGACCTGACAATGTCTCGACTAGAAATAAGCCTGAAATTTACAGTGATTTGGGGCTTGATATTTCTTCATCTCCATCTCTTGAGGATAGTCCAACCGGAAGTAGGGAGCCACTTCATGAATCTCCAGAAATCTTTTGTGAATCTCCATCCACCATTCTGGAGATCATGACAATCTTTCCAGTTCCAGGAGGTTCGTTACTTTCACCTCTGTCAGATTCTCTACTTCATTTATTTGAGGAAGAAGACACTTCTATTAAAAATGTTAAAGCAAGCAAGCTGCAAAAAGTTATGCCAGAAAATTTTACTATCTTATCTGACCCATCTCTGCAAGAAAAAGACATTAATGATTTCACATACAAGGAATACAAATCCAGAGAGAAGGGCCGAAAGTTAGTGGATGCACATGGGCTGACTTGCGAGGATATTATAACCACATCCTTGAAAAATGAAATTGGAGGCAAAACTCCAGGATCCCAGAAGGCTGTTTTTAGTGCCCGTGATATGTCATTACCATCCAATGCTCAGTCTATAGATGCAAAAGACCCCAATACGATGCCATTGATGGAAGGAAATCATGCACAAGATTTAAGAAAGGATGATGCTGCAGAGTTCAATGATGGCATGAGAGTGAATGGAGTAGGCAGTTTGGATAAGGAAATCTTTTCCTTAAAGAGAAAAGCATATGCAAAAACTGTTCTTACAGAGAAGGCATTTGAAGAAGCAAATGGTAAAGTTGACTTATGTAGAAAAAACAAGAGTAAATCCCAGAAACACTCTGATAAAAAGAAGGCTGATTCTGATAAAGATAAGATGAGGAAGGATTATGCAATTGAATGCGAGGAACATTTAAAGGAGCAACTTGTACAGAAAACTTGTTTGAGTGAAAAAATTGTTTTCAAGATGACACAAACTAAGGATCAAGCATTTGAGGGTGGGAAAATTATTAAGGGAAGCCAAAATAAAGGCAATATGCTTGCTGATTCAAGCAAGGAAAGCAATGCATTTTCTGTGGCACCTAAAAGTGTAAAAAAAATGTCTAATGTGAAAGGCTCACATTTAGAAACAACGTCAAAAATTCCTAAACCACAGAAGGAATTGAACAAAGGTCACCTTACTGAATCACAAAATGAACTATCGATGAGTGTTCAAGCTCAGAAGGTTGAGAACACGAGACACATGAATGGTTCCTCTAAATCTATCGAGAAATTGAAGGAAAGATCAATTAACAAGGGTGAAAATTGTCGTAATACTGGTCCAACAAATGTACAAGCACCCACAAATGATTCTGCCACAAATAACAATTCAGTGTCTGCTATTCCTGCCTTAGTTCTTATAGAGGATAATTGGGTATGCTGTGACATATGCCAACGATGGCGGCTTTTGCCATATGGAACCAATCCAGAAAGCCTTCCAAAGAAATGGCAATGTAGCATGCAAGTTTGGCTGCCAGGACTGAACAATTGCAGTGTCAGCCAAGATGAAACGACAAAAGCTTTCCATGAACTGTATCAGTTTCCAGCACCTGTTAGTGACACCAATCTAACTGCCCATCATAATATTGTTGCATCGAGTTTAACTTCAGCTGATGCTCTGAATCCTGATAAAAGGTCGGAAAATGTTATGCATAGCACATCTTTGAGTGGAAAGAAAAAGCATGGGTCAATGGATACGGCAGGATTGAATGATTCATCTTTGCGACATTTGCCAAATTCTTCAAAAAATTTTCCAGCATCTTCTGGAAATAAAAACGTTAATGATGCTGGTTACTGTATGGAGATGAACTCTTTGATCAAACCAAAGCCAGGACTGACAAGAAAGTCTATGGATATTGCAACAGAAAAGCCCATTCATAAACAGAAGGAGAAACATAAAGTTATTTCATCCAAAAGTGGAGGTGATTTAACTGAAAGGGTTGATAAATATTCAAAACCTTTGAGCAATAGAGGAATTGATGTAGATGGTCATAGAGCATCCAAGAAACTTAAGAGTGAGGGATCATACCATTCTCAAAAGGATTTGCCTTCTAGCATTGATACATCAAGCAAAACTATTGTCAATGGGGATACTGAATTCTTGGCAAAAGTCTCAAGGAATACTATGCAAAATTACAGTGATCATTCATCCTCTAAGGATTTGAAGTCTAAAGGTGCATCATCTAGAAAATCAAGGGAGCAAGCTAATCCATCTAATGGGAAACATAAAGAAATCTCTAGTGCTTCTGAGGCAGTAAAGTTCAGTAAGTATGATTTTATTGATAAGAAGAGGAAACATGAAGTTTGGCAAGAGAGCCAAGCTTGCCAGGAAATTTCAACGGGAAGTGAACATGCTGCTGGCAGCAGGCCTATGCTGAAAGAATCTTTGATTGATAGTGAGTCTAGGAGACATAAGAAGGTTAAGGTGTCAAAATCTGAAGGCAAAGAGTCTCATACAGTTTATTTTGGTGAAAATGCTGAAATGAAAGGTTGCTCAACAAGAATTGCTTTATCTGCTAATAAGAAGCATCTCTCTGATATAATCGATAATGATGCTGGACATCCTGCCTCAGATGAGCAAATGGTTCAATACCAAGGGAATGCGACATCAGGCCAGGCTTTAGATTGCTTGGATGGCTTGAAGCGGGATGTACCATACAAGTCTCTTGCAGCGACCACTTCAAGCTCTTCCAAAGTTTCAGGATCCCAAAAGGGTAAAATGAATTTTCCAGAAGCTAGAGGTTCACCAGTGGAGTCTGTTTCTTCATCTCCAGTGAGGATTTTAAACAATAGCAACAATTATGCTAGAAGAAACTCATCAATCAAGGATAATGCCATATCTACAGGTTACTCCGGGATGAACAGCCCAAAAAGATTCTCTGATGGTGAGTTGGATGGTTTTAGTGATCATTCAGGCACAAGGACAAAGGGTCAAACTCAGCCTAAGAACAATTGGAGAAAGTTGAACTTCAATTCTGACAAAGGAAAACATAAGGCCTTTGGTTCCTTAAACAAGCTCAAGGATTTACAAATTGGGAGAACTTGCAGGAGTGGCCGTACCGATTCTGAATTTGATCAGTTGAATTCTAGCAAAAAGGATGATTTGAAAAGCCATTCTAAACTTCACAAAGTTGGTGAGGTGAGAGATGGTAGTCCAGATGTAAACCACAATGATCTAACAGCACAACAAAATCTTCACAAGGCATCTTCTCAAGAGAAGCAAATTCCATCAAGCCTTTTAATTTCGGAGACAATCGATCGATCAGCCACGGAGTACAGGAAAGGGATGCAAATATCTAACACCACTAATGATAAACTTGAGAAAAATGTTCTTGCATCTCAAACTGCTCCAGGATCCTATAAGGGGGTTGAATTAGAGAACCCTTCTGTTGTCGCTGTAAATAGTGGGACATTAAAGTTAGCAGTACCATCCAGAAAGCTTGATGAACATAATGGAGCCCTTCCCAATTTGTCACGGCAATCCGCAAGTAGAGTGCCTGGGTCATCTAGTCCAATGAAGAAGGATGGCCATCCTAATGTAAATTCTATTATAAAAGAGGCTAGAGATTTAAAGCATACTGCTGCTCGCTTGAAGAATGAAGGCTTGGAGAATGAAAGCAGTGGCATTTATTTTGAGTCTGCTCTGAAATTTTTACATGCAGCATCCCTTTTGGAGCCTCCCAATTCAGAGAGTGCCAGATCAGGGGAGCTAGTTATATCCACACAAATGTTACTAATATATTTCGAAACTGCCAAGTTTTGCGAATTTTGTGCCCATGAATACGAGAAATTGAAAGAAATGGCTGCTGCTGCTTTAGCTTACAAGTGTGCTGAAGTGGCATATATGAAGGTTGCAATGTACAAGAGTTCCAGTGCTAACAAGGACCGGCTTGAGCTGCAAGTTGCACTCGATGCGCCACTACCTGGCGATTCACCATCGTCATCTGCTTCTGATGTTGATAACATAAATAATCATGGTGGGCTTGATAAGGTTGCTTCTGCCAGGGCTGTTAGCTCTCCTCAAATTGCTACCAATCATGCTATACCTGGCCGGAATCGACCCAATGTTGTGAGGATACTCACTTACCTAAATTATGTAAATTGTGCCTTCGAATCTTCAAAGAAATCAAATTATGCAATGGCAGCTGCTAGCTCTAACCTAGGAAAGAATGGGATTGACTTGAGCTCAGTCAGGACAGTTCTTGATTTTGACTACCACAATGTTGAAGCACTGTTACGGCTTGTGCGACGATCAATGAATTCCATTGGTCATTGACTGATTAGGTGTTTGCCATCTGCCAATAAGCTGCATTCTTTGGTATTTCTCTGCTATGTTGGATTGTGCTTCAAGCCGCAGCAAGTTACTTGCACTCAAAAGAGTTTTGAAGGAAAGATTTTCTGTACAGATTACATGGTTGGCAACTTTGTAAAGCCCTTTCTTACATTTTAGGATATTTCCGACTCAGGTTATGCGGATGCAAAATTGACCTAACTTTAGGCTTGCACATGCAATAAAATTGTAGTCTGAAGGGAGTTGAAAGGATGGACAAAGTATACCGCTTTTGATAAATTCCTTTGTTTCTCTATAGCATTCAAGAGGTGATAGTATCTTGCAAATAGTTTTTCCATTGCTTCTTGATCAAGAGCCCCTTCGATTCACACATAGATATAAACATCGATTCATAGACTCAATTTGTCGTTCTGCTCTTGCCTGATCAGGATCATGAAGACAATTTTGTGATTTCAATTTGAATAATGGTTCCCTTAAGATAATGGGGAGGCAAATTTTATTCATCGAGAAGCTTGGGACTTAACCAGCTGAAGGGAGGCTTAGAAGTTTGGTCTTCTTACGCCGGCGCTGTACATTGATCGATCTCACTGAAATTGTACATATGAGACCCACTCATTTCTTAGCGATTATATTATATTGTATAGCATTTATAGAGCCAGCCATTTGTTCTTCCAATAAAAGTCAAACGATGCAGCGGTACAGTCTGTTTTTATTTTAATTTAATCAATTTTCAAAAGTAGATTGTTTTGTTGATTTTGTTGATTTTTGCCCTGTCACTACTTGTCAATTT

Network for GWHGAAEX008493

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07496.14	zf-CW	637	682	1.50E-12

Protein Sequence

>GWHPAAEX008493
MLSVGSSNEGMKRPVLGLEGKGSERRRDMEENDLEEGEAFFGQDDDIDPDALSYIDEKLQHVLGHFQKEFEGGVSAETLGSKFGGYGSFLPAYQRSPPVLLSEPKSPAKVPGHSLSRSPYSLQHENPSVLANASIGKSNIAPAVQLSEKLSQKDTFITSSSTEDITQHEPSRPTQDSRDPKSLKVRIKVGPDNVSTRNKPEIYSDLGLDISSSPSLEDSPTGSREPLHESPEIFCESPSTILEIMTIFPVPGGSLLSPLSDSLLHLFEEEDTSIKNVKASKLQKVMPENFTILSDPSLQEKDINDFTYKEYKSREKGRKLVDAHGLTCEDIITTSLKNEIGGKTPGSQKAVFSARDMSLPSNAQSIDAKDPNTMPLMEGNHAQDLRKDDAAEFNDGMRVNGVGSLDKEIFSLKRKAYAKTVLTEKAFEEANGKVDLCRKNKSKSQKHSDKKKADSDKDKMRKDYAIECEEHLKEQLVQKTCLSEKIVFKMTQTKDQAFEGGKIIKGSQNKGNMLADSSKESNAFSVAPKSVKKMSNVKGSHLETTSKIPKPQKELNKGHLTESQNELSMSVQAQKVENTRHMNGSSKSIEKLKERSINKGENCRNTGPTNVQAPTNDSATNNNSVSAIPALVLIEDNWVCCDICQRWRLLPYGTNPESLPKKWQCSMQVWLPGLNNCSVSQDETTKAFHELYQFPAPVSDTNLTAHHNIVASSLTSADALNPDKRSENVMHSTSLSGKKKHGSMDTAGLNDSSLRHLPNSSKNFPASSGNKNVNDAGYCMEMNSLIKPKPGLTRKSMDIATEKPIHKQKEKHKVISSKSGGDLTERVDKYSKPLSNRGIDVDGHRASKKLKSEGSYHSQKDLPSSIDTSSKTIVNGDTEFLAKVSRNTMQNYSDHSSSKDLKSKGASSRKSREQANPSNGKHKEISSASEAVKFSKYDFIDKKRKHEVWQESQACQEISTGSEHAAGSRPMLKESLIDSESRRHKKVKVSKSEGKESHTVYFGENAEMKGCSTRIALSANKKHLSDIIDNDAGHPASDEQMVQYQGNATSGQALDCLDGLKRDVPYKSLAATTSSSSKVSGSQKGKMNFPEARGSPVESVSSSPVRILNNSNNYARRNSSIKDNAISTGYSGMNSPKRFSDGELDGFSDHSGTRTKGQTQPKNNWRKLNFNSDKGKHKAFGSLNKLKDLQIGRTCRSGRTDSEFDQLNSSKKDDLKSHSKLHKVGEVRDGSPDVNHNDLTAQQNLHKASSQEKQIPSSLLISETIDRSATEYRKGMQISNTTNDKLEKNVLASQTAPGSYKGVELENPSVVAVNSGTLKLAVPSRKLDEHNGALPNLSRQSASRVPGSSSPMKKDGHPNVNSIIKEARDLKHTAARLKNEGLENESSGIYFESALKFLHAASLLEPPNSESARSGELVISTQMLLIYFETAKFCEFCAHEYEKLKEMAAAALAYKCAEVAYMKVAMYKSSSANKDRLELQVALDAPLPGDSPSSSASDVDNINNHGGLDKVASARAVSSPQIATNHAIPGRNRPNVVRILTYLNYVNCAFESSKKSNYAMAAASSNLGKNGIDLSSVRTVLDFDYHNVEALLRLVRRSMNSIGH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	19.110
SRP064423	SRR2545915	Juvenile tuber	14.620
SRP108465	SRR5643513	five period of Gastrodia elata	8.600
	SRR5643514	five period of Gastrodia elata	9.250
	SRR5643515	five period of Gastrodia elata	9.490
	SRR5643524	five period of Gastrodia elata	9.820
	SRR5643525	five period of Gastrodia elata	10.980
	SRR5643528	five period of Gastrodia elata	9.440
	SRR5643658	five period of Gastrodia elata	9.960
	SRR5643659	five period of Gastrodia elata	9.090
	SRR5643660	five period of Gastrodia elata	9.550
	SRR5643661	five period of Gastrodia elata	8.650
	SRR5643662	five period of Gastrodia elata	9.350
	SRR5643663	five period of Gastrodia elata	9.460
	SRR5643664	five period of Gastrodia elata	8.550
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.800
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.440
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.270
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	8.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	8.880
SRP279888	Gastro	Gastrodia elata tuber	9.74
	Juven	Juvenile tuber	13.62
	Mother_Gastro	Mother tuber of Gastrodia elata	11.75
	Mother_Juven	Mother tuber of Juvenile	18.53