Detail information of GWHGAAEX008498/evm.TU.scaffold_22.71
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|430745933|ref|YP_007205062.1| | 1.00E-14 | serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658] |
| KOG | KOG1187 | 6.00E-86 | Serine/threonine protein kinase |
| nr | gi|672164459|ref|XP_008802106.1| | 5.40E-121 | PREDICTED: proline-rich receptor-like protein kinase PERK15 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9LK35|THE1_ARATH | 4.00E-50 | Receptor-like protein kinase THESEUS 1 (Precursor) |
| trEMBL | tr|V4S7L8|V4S7L8_9ROSI | 7.00E-113 | Uncharacterized protein {ECO:0000313|EMBL:ESR32891.1} |
| TAIR | AT3G26700 | 6.00E-86 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000017 | 4541353 | 4545920 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008498
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 163 | 353 | 3.50E-32 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-IXa |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.170 |
| SRR2545915 | Juvenile tuber | 4.140 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.640 |
| SRR5643514 | five period of Gastrodia elata | 4.350 | |
| SRR5643515 | five period of Gastrodia elata | 3.840 | |
| SRR5643524 | five period of Gastrodia elata | 4.350 | |
| SRR5643525 | five period of Gastrodia elata | 5.320 | |
| SRR5643528 | five period of Gastrodia elata | 7.540 | |
| SRR5643658 | five period of Gastrodia elata | 5.070 | |
| SRR5643659 | five period of Gastrodia elata | 3.820 | |
| SRR5643660 | five period of Gastrodia elata | 3.890 | |
| SRR5643661 | five period of Gastrodia elata | 4.060 | |
| SRR5643662 | five period of Gastrodia elata | 3.490 | |
| SRR5643663 | five period of Gastrodia elata | 4.780 | |
| SRR5643664 | five period of Gastrodia elata | 3.590 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.070 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 6.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.770 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.230 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.720 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.590 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.660 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 5.180 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.350 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.350 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.92 |
| Juven | Juvenile tuber | 7.02 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 6.14 | |
| Mother_Juven | Mother tuber of Juvenile | 5.80 |