Detail information of GWHGAAEX008510/evm.TU.scaffold_22.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|57641437|ref|YP_183915.1|1.00E-0650S ribosomal protein L18e [Thermococcus kodakarensis KOD1]
KOGKOG17143.00E-11660s ribosomal protein L18
nrgi|743820035|ref|XP_010931680.1|9.66E-123PREDICTED: 60S ribosomal protein L18-2 [Elaeis guineensis]
Swissprottr|Q940B0|RL183_ARATH8.00E-11760S ribosomal protein L18-3
trEMBLtr|A0A061F4C5|A0A061F4C5_THECC1.00E-121Ribosomal protein L18 {ECO:0000313|EMBL:EOY11542.1}
TAIRAT5G278503.00E-116Ribosomal protein L18e/L15 superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001770127467017485-
Transcript Sequence

Network for GWHGAAEX008510

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17135.3Ribosomal_L1821875.20E-95
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02883RP-L18e, RPL18 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms205.130
SRR2545915Juvenile tuber248.050
SRP108465SRR5643513five period of Gastrodia elata549.180
SRR5643514five period of Gastrodia elata515.660
SRR5643515five period of Gastrodia elata494.420
SRR5643524five period of Gastrodia elata501.420
SRR5643525five period of Gastrodia elata257.420
SRR5643528five period of Gastrodia elata270.680
SRR5643658five period of Gastrodia elata195.650
SRR5643659five period of Gastrodia elata519.460
SRR5643660five period of Gastrodia elata542.900
SRR5643661five period of Gastrodia elata586.690
SRR5643662five period of Gastrodia elata430.880
SRR5643663five period of Gastrodia elata421.920
SRR5643664five period of Gastrodia elata397.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1395.860
SRR6049655Rhizomagastrodiae_C368-T10_good_1273.480
SRR6049656Rhizomagastrodiae_C368-T07_good_1465.150
SRR6049657Rhizomagastrodiae_C368-T07_good_1387.700
SRR6049658Rhizomagastrodiae_C368-T04_good_1368.790
SRR6049659Rhizomagastrodiae_C368-T04_good_1355.930
SRR6049660Rhizomagastrodiae_C368-T01_good_1435.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1404.630
SRR6049662Rhizomagastrodiae_C368-T01_good_1550.210
SRR6049663Rhizomagastrodiae_C368-T01_good_1513.010
SRR6049664Rhizomagastrodiae_C368-T10_good_1614.070
SRR6049665Rhizomagastrodiae_C368-T10_good_1614.070
SRP279888GastroGastrodia elata tuber 506.12
JuvenJuvenile tuber594.86
Mother_GastroMother tuber of Gastrodia elata 281.86
Mother_JuvenMother tuber of Juvenile 407.75