Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG0654	1.00E-130	G2/Mitotic-specific cyclin A
nr	gi\|743872767\|ref\|XP_010906637.1\|	1.41E-150	PREDICTED: cyclin-A3-1-like [Elaeis guineensis]
Swissprot	tr\|Q3ECW2\|CCA34_ARATH	2.00E-129	Cyclin-A3-4
trEMBL	tr\|M0T612\|M0T612_MUSAM	2.00E-145	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P11130_001}
TAIR	AT1G47230	1.00E-130	CYCLIN A3;4

Scaffold	Start	End	Strand
GWHAAEX00000215	107395	109327	+

Transcript Sequence
>GWHTAAEX008514 ATACAGCCCTCTTCTTCCCTCTCTCTACCTCTTGAGGACAAGGAGGAGCATACAAGGAAGAGAAGGATCCATGGCGGACAAAGAGAATTGCTCTCGCATTACTAGCGCATCTGCCAAAAGGGAATCCGCCGACACAGACGCAGAGCAGCCTCCCAAAAAGATGAAGAGGGTTGCGCTTGGCGAGCTTCCCACCCTTTCAAATGCCTTAGTTGATCTATCCACTCTCGATCGCACAATTGGCAAGCCCAGTCACAGATTCAAAGCGGCTAATAAATCACTCTCTGTAAATCTCTACGGGGACGAAGATCTGGGCGATCCCCAGTTCTGTCCTCAGTACGCCTCTGCCATCTACAGCTACCTTCGATCAATGGAGGCTGAAGAAAAGAGAAGGCCACTGGCAGGGTATCTTGAGAGCATTCAAACGGATATGAATCCCAATATGAGGGGAATTCTGGTGGATTGGCTGGTGGAAGTTTCAGAGGAATATAATTTGGCCTCCGATACTTTGTATCTCGCCGTTTCTTATATCGATCGGTATCTATCGTGTAACCCTATCAACAAGCAGAGGCTTCAGCTTCTTGGAGTTTCAGCTATGCTCATTGCCTCGAAATATGAAGAAATCTCTCCTCGCGAGGTTGAAGATTTTTGTTACATAACAGATAATACATATACTAAGAAACAGGTGGTGGAGATGGAAAGTGAACTACTAAAGATTCTTAAGTTTGAGACCGGAAATCCTACTATCAAATCTTTTTTATGGAGATTTACAAAAATTTCTCAGGAAGATGGAGAATATTCAAGCTTACTTTTGGAGTTAATGGGATGCTATCTTGGAGAGTTGAGCTTGTTAGATTACAAATGTTCAAAATTTCTACCATCAATTGTAGCTGCTTCAATTATTTTTGTCTCAAGATTTTCTATTAATTCAAAAAAATCTCCTTGGAACAAAAAATTACAACAATATACTTGTTATCAGGTTTCAGATTTGAAGGAATGCATTCATTTGATCCATGATTTACAATTGAATAAGAATGGATTTAATTTAGTGGCTGTTAGAGAAAAATACATGCAACATAAGTTTAAATTTGTGTCATCAATTGATCCTCTTGCTGTTATTCCTCAATCATTTTTATTGGATTTGGAAGTCAAAGCCCTTTGAAGGTGTTTGTTTGTACATAATAAATATAATATGATTGAGTTGTTATATGTAATTTTTTCTTGCATATATAATCTTTCTTTTTGCATTTTTATGCAAATAAATGTTTTAGTAATTTGGAAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module2

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00134.22	Cyclin_N	93	219	1.10E-42
PF02984.18	Cyclin_C	223	345	3.80E-29

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K06627	CCNA	AMPK signaling pathway	map04152
		Cell cycle	map04110
		Cellular senescence	map04218
		Progesterone-mediated oocyte maturation	map04914

GO term	Ontology	Name
GO:0005634	Cellular Component	nucleus

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.250
SRP064423	SRR2545915	Juvenile tuber	1.000
SRP108465	SRR5643513	five period of Gastrodia elata	5.240
	SRR5643514	five period of Gastrodia elata	5.750
	SRR5643515	five period of Gastrodia elata	2.660
	SRR5643524	five period of Gastrodia elata	4.010
	SRR5643525	five period of Gastrodia elata	0.190
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.200
	SRR5643659	five period of Gastrodia elata	1.680
	SRR5643660	five period of Gastrodia elata	1.120
	SRR5643661	five period of Gastrodia elata	0.420
	SRR5643662	five period of Gastrodia elata	0.530
	SRR5643663	five period of Gastrodia elata	1.760
	SRR5643664	five period of Gastrodia elata	0.220
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.700
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.500
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.720
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.930
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.290
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.660
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.880
SRP279888	Gastro	Gastrodia elata tuber	0.16
	Juven	Juvenile tuber	0.65
	Mother_Gastro	Mother tuber of Gastrodia elata	0.03
	Mother_Juven	Mother tuber of Juvenile	0.08