Detail information of GWHGAAEX008530/evm.TU.scaffold_220.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17601.00E-30Molecular chaperone Prefoldin, subunit 4
nrgi|573938345|ref|XP_006651613.1|9.05E-36PREDICTED: probable prefoldin subunit 4-like [Oryza brachyantha]
Swissprottr|Q9M4C4|PFD4_AVEFA2.00E-32Probable prefoldin subunit 4
trEMBLtr|J3LQY7|J3LQY7_ORYBR7.00E-36Prefoldin subunit 4 {ECO:0000256|PIRNR:PIRNR016477}
TAIRAT1G087801.00E-30ABI3-interacting protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000215440968456141-
Transcript Sequence

Network for GWHGAAEX008530

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01920.19Prefoldin_2741578.00E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006457Biological Processprotein folding
GO:0051082Molecular Functionunfolded protein binding
GO:0016272Cellular Componentprefoldin complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.880
SRR2545915Juvenile tuber22.060
SRP108465SRR5643513five period of Gastrodia elata28.270
SRR5643514five period of Gastrodia elata25.600
SRR5643515five period of Gastrodia elata23.150
SRR5643524five period of Gastrodia elata24.530
SRR5643525five period of Gastrodia elata16.750
SRR5643528five period of Gastrodia elata13.890
SRR5643658five period of Gastrodia elata17.820
SRR5643659five period of Gastrodia elata31.610
SRR5643660five period of Gastrodia elata41.390
SRR5643661five period of Gastrodia elata36.660
SRR5643662five period of Gastrodia elata38.700
SRR5643663five period of Gastrodia elata36.100
SRR5643664five period of Gastrodia elata43.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.880
SRR6049655Rhizomagastrodiae_C368-T10_good_116.390
SRR6049656Rhizomagastrodiae_C368-T07_good_124.500
SRR6049657Rhizomagastrodiae_C368-T07_good_129.540
SRR6049658Rhizomagastrodiae_C368-T04_good_127.330
SRR6049659Rhizomagastrodiae_C368-T04_good_122.970
SRR6049660Rhizomagastrodiae_C368-T01_good_118.390
SRR6049661Rhizomagastrodiae_C368-T04_good_125.810
SRR6049662Rhizomagastrodiae_C368-T01_good_131.950
SRR6049663Rhizomagastrodiae_C368-T01_good_128.150
SRR6049664Rhizomagastrodiae_C368-T10_good_138.430
SRR6049665Rhizomagastrodiae_C368-T10_good_138.430
SRP279888GastroGastrodia elata tuber 23.90
JuvenJuvenile tuber16.95
Mother_GastroMother tuber of Gastrodia elata 11.69
Mother_JuvenMother tuber of Juvenile 14.97