Detail information of GWHGAAEX008531/evm.TU.scaffold_220.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743791645|ref|XP_010923489.1|7.84E-110PREDICTED: light-inducible protein CPRF2-like [Elaeis guineensis]
Swissprottr|Q99090|CPRF2_PETCR4.00E-73Light-inducible protein CPRF2
trEMBLtr|M0S7F2|M0S7F2_MUSAM3.00E-91Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P12610_001}
TAIRAT5G287707.00E-50bZIP transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000215456702496682-
Transcript Sequence

Network for GWHGAAEX008531

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_12743271.00E-13
PF12498.7bZIP_C3424525.40E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms185.880
SRR2545915Juvenile tuber124.430
SRP108465SRR5643513five period of Gastrodia elata76.770
SRR5643514five period of Gastrodia elata68.880
SRR5643515five period of Gastrodia elata67.200
SRR5643524five period of Gastrodia elata68.180
SRR5643525five period of Gastrodia elata154.910
SRR5643528five period of Gastrodia elata118.500
SRR5643658five period of Gastrodia elata185.520
SRR5643659five period of Gastrodia elata114.960
SRR5643660five period of Gastrodia elata151.840
SRR5643661five period of Gastrodia elata125.420
SRR5643662five period of Gastrodia elata147.950
SRR5643663five period of Gastrodia elata142.820
SRR5643664five period of Gastrodia elata211.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1163.010
SRR6049655Rhizomagastrodiae_C368-T10_good_1107.700
SRR6049656Rhizomagastrodiae_C368-T07_good_1118.800
SRR6049657Rhizomagastrodiae_C368-T07_good_1209.780
SRR6049658Rhizomagastrodiae_C368-T04_good_1229.770
SRR6049659Rhizomagastrodiae_C368-T04_good_1274.740
SRR6049660Rhizomagastrodiae_C368-T01_good_1183.210
SRR6049661Rhizomagastrodiae_C368-T04_good_1182.560
SRR6049662Rhizomagastrodiae_C368-T01_good_186.630
SRR6049663Rhizomagastrodiae_C368-T01_good_1139.170
SRR6049664Rhizomagastrodiae_C368-T10_good_182.760
SRR6049665Rhizomagastrodiae_C368-T10_good_182.760
SRP279888GastroGastrodia elata tuber 120.38
JuvenJuvenile tuber111.12
Mother_GastroMother tuber of Gastrodia elata 113.42
Mother_JuvenMother tuber of Juvenile 152.00