Gene detail

Detail information of GWHGAAEX008536/evm.TU.scaffold_220.25

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743759842\|ref\|XP_010934088.1\|	0	PREDICTED: uncharacterized protein At1g04910-like [Elaeis guineensis]
Swissprot	tr\|Q8W486\|Y1491_ARATH	2.00E-49	Uncharacterized protein At1g04910
trEMBL	tr\|A2Y030\|A2Y030_ORYSI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:EAY96440.1}
TAIR	AT3G03810	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000215	644595	673636	-

Transcript Sequence
>GWHTAAEX008536 TGGCATTTGCTTTCATTATAGCATGAGACCTATAAATAAATTCACTACACGGCAAAATTTGAGGGATTCGAGCGAAATAAAAATTCCCGGTTGCTCCTCCACTCACGCCTCCATTCTTCTCTTTCTACTGCGAGCGGCGTGGAATCTCTCGGACAACGACTTCTCTGCTCAGAGGATCCTCTGAGCGTTTCTACAGAGCTCCACCGCATCCTTCACCGTCGGCCGAGCCTTTGACAGAGAAACTCGAGTCTGCGCATCGATCTTCTCCGCGAAGTGCCGATCTTCTCAGCTCTGATCGTGCATATTCTTCGCGTTGATCTTCTAGCATTCACCTTGTTCTATTCGCCAATCTCGTCATCGCGGCTTCCAAGCTCATCTCCTACGCTGAATGGAGTTGGATTTGTGCATACAAATTGAAATATCGATGAGAATATAAGATGGCCTGCACAAACAAATTGAAGTTATCTGCCCTAGTGGGGGTTGTTTTGTCTGTGGCGTCGCTTGTTGTACATCTTCTGCTGGCAAAATATTCCGCTGGGGAAGTCATACCATATAAGTTAACTGGTGATGGAATTTACCAAATTGGCCAGAAACTACGGTATAGAAAGCTATGGGGATCTGTACAATCTTTGGAAGCTCTGCAACCATGTGCTAATCCTAGAAAGTTTTATCCAGTACCAAGAGAGCACAATGGTTTTTTGTATGCTAAGATTTATGGCGGATTTGATCATGTCAGATCTTCGATCTGTGACCTTGTTGCTGTTTCAAGATTGCTAAATGCAACCCTCATCATTCCTGAAATTCAAGATACTCTTCGCTCTAAAGGAATCAGTTCCAAGTTCAAAAGTTTTTCATATGTCTACAACGAGGAGCAGTTCATTGCTGCACTATCGAATGATGTAGTAATAGTGAAGAGCTTACCTGTCGATCTTAAGCGAGAGAGAAAAATCAAGAAGTATCCTACCTTTTCTATCAGATACTCTGCATCTCCTAGCTTTTATATTAAGGAAGTGTTGCCCAAACTGAAGGTTTCAAAAGTTATTGGCTTGTTAATTGCTGATGGTGGGTGCCTTGAGTCCATTCTTCCCAAGGACATGGATGAGTATCAGAGGCTTCGCTGCAGAGTTGCTTTTCATGCCCTACAGTTTCGTCCAGAAATTCAAGCTCTTGGAAATTTGATGATAGCAAGGTTAAGAGCTTCTGGTCGTCCGTACCTAGCATTCCCTCCTGGTCTTACAAGAGATTCCCTTGCATTTCATGGTTGTGCTGAGCTTTTTCAGGATGTTCACACTGAACTCATACAATATAGAAGAAAGCAGATGATCAAGCGTGGGAGTATCCAAGGAAATCTGAGTATGGATTCTATGGTTCAAAAAAGTAAGGGATTTTGTCCACTTATGCCTGAAGAGGTTGGACTTCTCCTTCGAGCAATGGGTTATCCTTCAGACACAGTGATATATTTGGCCGGCGCAGAAACCTTTGGTGGTCAACGAATTCTTGTACCTTTGCGGGGAATGTTTTCAAACTTGGTTGACCGAACTTCTTTGTGCAGCAAGAAAGAGTTGTCTAGCTTGTTGGGCCCAGAATATCCCATTCCCTTGAATTTTCCCAACCCGCCACCCCAGAAAAGCAAGAAACAACTTATTAGAGAATGGAACAGAGCCGGGCCTCGTCCTAGGCCTCTTCCTCCACCACCTGCCAGACCCTTCTATCAGCATGAGAAGGAAGGCTGGTATGGTTGGATTACAGAGAATGACACTGAACCAGATCCTTCACTTATGGATCTGAGAATGCAAGCACACAGGATGATATGGAATGCGCTTGATTATCATGTTTCTGTGGAAGCTGATGCATTTTTTCCAGGATTCCATGATGATGGTAGCGGGTGGCCTGATTTTTCGAGCCTAGCTATGGGCCACCGTTTGTATCAAACAGCTTCTTCTAGGACCTTTCGTCCCGACAGGAAAATCATATACAGACTTCTGGAGGTCATCAGGGACAATCAGTACCACCCAAAACAAAATTGGACGGTTCTGATTCGCCAGCATCTCAACAGCAGCGTCGGGGTGGAGGGGCTGATATCGATGGCTCGAACGTCAAAGCCAAGATCGTTCATCTCGCATCCGTTGCCGGAGTGCTCGTGCAGAGCGGCGGCGCCAAAGCCGTCCGAGGCGGCGGGCTCCGCCGCGACTGCCCCCGACGGCCGAGTCCTGTACGGAAACGAAGAGAGATGCCCCGACTGGCTCGTGCGCGGCCTCGAAACGGTCGTCACCGATTTGGGCGACGCCAGAGACGAAAACGAAGAGCTTCCGGAAGACGAGCCTTTTTCGCCGGAGGAGCAGGATTCCGGTGATGCAAGCAGACCTAACACTGACCAGGAGGAGGAAGAAATGGATCCAGATGATTAGAAAAATGTCATGTATATACAGTATTCTTTCTACTAATGTTGTGAAATAATATAGCGCCTGCTTTACATTTTGTTAGGATAGTTTTTTTTTTTTTTTT

Network for GWHGAAEX008536

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	88	385	2.10E-42

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.320
SRP064423	SRR2545915	Juvenile tuber	9.810
SRP108465	SRR5643513	five period of Gastrodia elata	13.070
	SRR5643514	five period of Gastrodia elata	11.210
	SRR5643515	five period of Gastrodia elata	10.360
	SRR5643524	five period of Gastrodia elata	10.810
	SRR5643525	five period of Gastrodia elata	11.150
	SRR5643528	five period of Gastrodia elata	10.670
	SRR5643658	five period of Gastrodia elata	10.820
	SRR5643659	five period of Gastrodia elata	5.810
	SRR5643660	five period of Gastrodia elata	4.970
	SRR5643661	five period of Gastrodia elata	6.210
	SRR5643662	five period of Gastrodia elata	4.140
	SRR5643663	five period of Gastrodia elata	3.030
	SRR5643664	five period of Gastrodia elata	4.290
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	18.970
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.700
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.410
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.410
SRP279888	Gastro	Gastrodia elata tuber	5.18
	Juven	Juvenile tuber	10.40
	Mother_Gastro	Mother tuber of Gastrodia elata	9.36
	Mother_Juven	Mother tuber of Juvenile	8.93