Detail information of GWHGAAEX008537/evm.TU.scaffold_220.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186684438|ref|YP_001867634.1|1.00E-17twin arginine translocase protein A [Nostoc punctiforme PCC 73102]
nrgi|672129273|ref|XP_008788140.1|2.46E-32PREDICTED: sec-independent protein translocase protein TATA, chloroplastic-like [Phoenix dactylifera]
Swissprottr|Q9XFJ8|TATA_MAIZE8.00E-31Sec-independent protein translocase protein TATA, chloroplastic (Precursor)
trEMBLtr|W5FAT4|W5FAT4_WHEAT3.00E-32Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_5BL_48D158015.1}
TAIRAT5G287502.00E-26Bacterial sec-independent translocation protein mttA/Hcf106

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000215675304683724+
Transcript Sequence

Network for GWHGAAEX008537

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02416.15MttA_Hcf106721201.40E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03116tatA Protein export map03060
Bacterial secretion systemmap03070

Gene Ontology

GO term OntologyName
GO:0043953Biological Processprotein transport by the Tat complex
GO:0015031Biological Processprotein transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.010
SRR2545915Juvenile tuber40.780
SRP108465SRR5643513five period of Gastrodia elata75.620
SRR5643514five period of Gastrodia elata76.080
SRR5643515five period of Gastrodia elata76.100
SRR5643524five period of Gastrodia elata81.840
SRR5643525five period of Gastrodia elata133.800
SRR5643528five period of Gastrodia elata135.020
SRR5643658five period of Gastrodia elata129.030
SRR5643659five period of Gastrodia elata76.360
SRR5643660five period of Gastrodia elata77.320
SRR5643661five period of Gastrodia elata84.810
SRR5643662five period of Gastrodia elata111.580
SRR5643663five period of Gastrodia elata110.620
SRR5643664five period of Gastrodia elata105.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_160.920
SRR6049655Rhizomagastrodiae_C368-T10_good_130.430
SRR6049656Rhizomagastrodiae_C368-T07_good_162.230
SRR6049657Rhizomagastrodiae_C368-T07_good_149.780
SRR6049658Rhizomagastrodiae_C368-T04_good_152.430
SRR6049659Rhizomagastrodiae_C368-T04_good_152.230
SRR6049660Rhizomagastrodiae_C368-T01_good_150.540
SRR6049661Rhizomagastrodiae_C368-T04_good_154.000
SRR6049662Rhizomagastrodiae_C368-T01_good_168.080
SRR6049663Rhizomagastrodiae_C368-T01_good_157.210
SRR6049664Rhizomagastrodiae_C368-T10_good_166.280
SRR6049665Rhizomagastrodiae_C368-T10_good_166.280
SRP279888GastroGastrodia elata tuber 146.48
JuvenJuvenile tuber103.71
Mother_GastroMother tuber of Gastrodia elata 166.56
Mother_JuvenMother tuber of Juvenile 109.42