Detail information of GWHGAAEX008543/evm.TU.scaffold_220.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672129258|ref|XP_008788132.1|1.69E-61PREDICTED: auxin-induced protein 22D-like [Phoenix dactylifera]
Swissprottr|O24542|AX22D_VIGRR2.00E-60Auxin-induced protein 22D
trEMBLtr|D6MKD3|D6MKD3_9ASPA1.00E-63Auxin-responsive protein {ECO:0000256|RuleBase:RU004549} (Fragment)
TAIRAT5G437007.00E-59AUX/IAA transcriptional regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000215954513955711-
Transcript Sequence

Network for GWHGAAEX008543

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.15AUX_IAA321592.00E-57
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.730
SRR2545915Juvenile tuber60.160
SRP108465SRR5643513five period of Gastrodia elata38.750
SRR5643514five period of Gastrodia elata41.900
SRR5643515five period of Gastrodia elata82.230
SRR5643524five period of Gastrodia elata56.770
SRR5643525five period of Gastrodia elata36.160
SRR5643528five period of Gastrodia elata27.280
SRR5643658five period of Gastrodia elata188.500
SRR5643659five period of Gastrodia elata70.880
SRR5643660five period of Gastrodia elata27.890
SRR5643661five period of Gastrodia elata35.580
SRR5643662five period of Gastrodia elata13.870
SRR5643663five period of Gastrodia elata9.420
SRR5643664five period of Gastrodia elata9.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.760
SRR6049655Rhizomagastrodiae_C368-T10_good_123.570
SRR6049656Rhizomagastrodiae_C368-T07_good_149.220
SRR6049657Rhizomagastrodiae_C368-T07_good_139.740
SRR6049658Rhizomagastrodiae_C368-T04_good_144.400
SRR6049659Rhizomagastrodiae_C368-T04_good_137.620
SRR6049660Rhizomagastrodiae_C368-T01_good_149.660
SRR6049661Rhizomagastrodiae_C368-T04_good_152.280
SRR6049662Rhizomagastrodiae_C368-T01_good_154.620
SRR6049663Rhizomagastrodiae_C368-T01_good_142.180
SRR6049664Rhizomagastrodiae_C368-T10_good_125.090
SRR6049665Rhizomagastrodiae_C368-T10_good_125.090
SRP279888GastroGastrodia elata tuber 94.41
JuvenJuvenile tuber7.75
Mother_GastroMother tuber of Gastrodia elata 26.48
Mother_JuvenMother tuber of Juvenile 12.20