Gene detail

Detail information of GWHGAAEX008550/evm.TU.scaffold_221.6

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000219	419723	423914	+

Transcript Sequence
>GWHTAAEX008550 TATCATATATGGGCTTTGTTTTGGTAATTTATGCCATTTGATATCTGATGTGCAATCTATCTGTGGCTGATTATCTTTTAAAGATGGTGAATATGTAATTAAACTACTTTGCGACACTGGCTGTTTTACTTTTGAATGAACCAACCTCCTTCTACTCTTTTTCCAGCTAACATTTATATTATCAACTTTTTTGTTTTTGTTTTTTTTTCCAAGAAGAAGCTTCTCAACATAACTCTTGTAATTTAGCTTTTGTTTTTTATATTTATATTTTTCATGTGTAAAATATTTTTGATAGAGAGACGTGTTGATTTCAAATCCATATTTTTTAGCATCACATTTATGATGAACTTATCAAATAAGAATTATCATGTGATTTCTCTTAAAATCAAGCATTTTATCATAAAATATCAACATTCCAAGCTTTCACACTAGATGGCATGAGTGATTTGCTGCTTCAAAATTTCTATATGTAATACATGATGTAAACTATTTGAAGCAGAGTTTCCTATTAAATTTTTGGATGCAATGATTTTTGATAAGCTTTGAATAAGAAGATCTGATATTCTAGATAGATTATAAGTAATGTAATTGAAGGGAGGTGTGATGATTTCAAATCTATAATGTGTTACTACATAAATATGATGAGTATATCAGACATGCACTACCATTTGAACTCTCTTTGTTATTCTTTAATTTAAACTTCTTGCTATTGATTCTTTCACATTTTGATAAGTGATCCAAGATGAAATTTTGTTAATTTATGAAATTTTTTTATTTATGCAAATAAGCACAATCTTTTGGTTAAGGTTGTGTATTGTTAGGAATCATGAACTTTATAAAACACAAGTACTTCCAATATGTGATCAGATTGCAAAATTGATAAAAAAGCTTGTGAGATTATAACATTTGGTTAGTAGATATGCTAACATTACCCATCTGTCATTATAATATTATTTATTGGCCGTCTTTTTTTGGCTGATCATTTTGTAAAACAGTGTATAAAATTGAACAGTTTGCGACCTTTTGAATGAACTTTTGATTATTATTTTTTTTCGGCTAACATTGCATTTATGTTCTAAACTTGTGCAGTTTAAGACAATTATTGATTTTTTATGTTTGTGCGCTTGAAAGCAGAGTGCTCACGTGTTGCTTCATATTTTCTATACATATAATTTATAAAGAAAAGTATTTGAAGTATAGCGTTCAATTAATGATTTTTTATAAGCTTTGAATAGGAATAATTGATTTTATAGTCCATTTACTGAAGTTTCTATAATTTTAAATATTATCTTCTCAAAATTTCAGAAATTAGGGAGAATTAGTGTTTAAAAAAAAAGTGACATGGCGAGAGATTTAAATTTGACAGGTAAGTTTGAATAGATGCCATACACATAATGACAAAATATCATTTTTTAGCATTCTTAGATGCCCATAATTTAAGCCAACACAACTCCCAGTGTTTCAATATTCTGTGCACGAAAACAGATCATGGAAACACAGATCTTAGGGACCATGTGAATTACTTCAAGTCGGTAGTATCACTACTTAATTTGAGTTATACAGTGAAGTGCAAAATCTTGGCGTTGACACCAATGAAACTGCTCGGCAATGGTTTAATTAGTTGCCTTGCGAGAATGCAAAAGTTTTTGCCAGCTCGGCATGATGTTTGTTATACACCTTTGCCATTACCCAGACCATTAATCTTATAGCTTAAGATAGTGTTGGAGCTGGAGGAAGGAGGTTTTCAGGCTTATCCAGGCCTCCTACTACATACTCATTGAAATTGACCCACCATTCGCCTTGTTTTCATCAATAGGCTACATAAGTTGGTGTTTCAATTTAGCGGTATAAGGAAATTTTGATCACCATGGCTGAACTGCTTTAAAGCGCCATGAAATATGTCAATGTTGAATTTAGCTACCTAACTACTGAAAGTGTCACCAGTGAGGTCCTTACTATCTCCACAGTGAATAATAACATTTGAGTGACGAAAAGTTCCATGCACACTTGTAGGAAAATTAGTTGCAGTGAGTTCGCCATAGAAGGGTATTTTGTCCTGGGAACATGAAGAATTTTTCAACATTTTGTGTTCTTTGACCACTACTGTATATTTGCTACTTTTTATTTAAAGATTTATTTCATTTGCATTCTTAACATTCTTCCAATTTTCCCAATATTTTCTTTAGGCACTTTAAGAAATAGTTTTATTTTAATGAAGCATTGGATTTATTTTACTCTTTATTTGTGCACTTATGAGTCATGTATGATTATTTATATTTAATGTTTTGTATATTTATGTTTTTATTTGAAATATTTCAGTTGTCGGTTGAATCAGGTTGTGGGGTTCTGTTTGGGTCTACAATGCTGATCATTTTAGCAAATGAGTTGGGGTTAGGTCGACCTATTTCTGATGTGCATGGTTGGGAAAATATTATAACATGACCAGATTTTTTGTTCTTGTACTCAATAATGCTGAACTAATGTGACTTTGCATGTGGTTGGGTATGCTCTTATATAATTATTTGAGCCGAAGCTTTTTTGAGAGTTGTATGTAAAAAGAAGTGCAAAGTCTTCACAATGATACTCATGAAAATTGCTTGACGATGGTTTATATCACTGCGTTAATGTGATAAATTACTTACAGCTCGCCACGGTGTTTGTTATACAAATTTGCTGCTGTCTGACCATCAAAGTCTTGTACAATATAAGATAGTGTTGGAGTAGAAGGAAAAGGAGTCGTTTTGCTGTTGCCTGGCTTACCTTGGCCTCCCCCGACATATTTGACCCAGTGAGGTCCTCACAACTCTCCAAAGTGAATAAGCTCATTTGGGTGCAGAAAAGTTCCCTGCACACTTATAGGAAAATTAGTTGTAGATTTAATTGAGCCAAAGTTTTTTGACAGTTGTATGTAAAAAAAGTCTTCACAATGATATACTCATGAGTATTGCTTGACGTGGTTTAAGTCATTGCTTTACAAATTTGCTGCTATCTGTCCATCAAAGTCTTATACAACATAAGATTGCAGTTGAGAAAGAGGAAAATGAGTCGTTATGCTATTGCCCGGTTTTCCTAGGCCTCCCCTGACATACTTGACGAAGATCGACCCATCATTTACTTTGCTTTCATAGCAAACCTACATAAGTTGGGGTTTCAATTTAGTTTAAGGAACCTCTTTTCACCATGGCCAAACTACTTTTATGCACCACAAAATATTTCAATGCCTAATTTAGTTAGCTAATTATCGAAAGGGCCAGGTGTGATGGATGTCCTTACGACTAGTGCAATAGTGAATAAGAACATTGGGCAGCAAAATGCACCCAACTTCCTTGGGTGCAGGAAAATCAGTTGCTGCGATCTGCCATGGAAGGACATTTTATTTTTTGCTCTAACATTTTGTTTTTGTGAGTACTGTAGAGTTTTTTTCATTCTCTTTTCTTTGTCTACTATAGGTTCTACCTTTTGTGCAGAGATATTTTTTCATTTTGCATTCTTAGCACTTCCTCCAATTAGCACAAATTTTTCTCTGTGCACTAAGAAAAAAATAAAACATTGGATTCATTGCGTTATCTTCATTTGTGTACTGATGAATCATGTATGCTTATTTAAGATTATATTCTTTGTTTATTCATATTTTGAATTGAAATAATTATGAGGGTCGACTCAAGTTATGCAGGTTGTTGGGTTTTGTTTGGTTTGTTTGGGTCTGTGATGCTGACCATTGTAGCGAATGGGTTGGAGTTGTGTTGGCATATTTTGGGTTAGGCGAACTTTGATATTAAGATATGCCTACCCATTATCACATTTTAACGCATCCTCAGTTAATTAATTGTGAAAGCAAATAGATGTATATCAATGTTCTTGGTTAATGCTCGATAATGCTGAGCTACATGACTCGACATGTGAATGAGCATGTTAGGATGTAATTTGATTGAGTCGAGGCTGTCTCGCATTGGTTGTCTCTGCTAGTTCATTCTTGATTCCCAAATCAGGTTGATATTTGTGGATAAAGCTAGACTAGTAATTTTAAATGTTTATATTGTGAATGCTAGATTATTTCTGATAGACTTTCACCTTAAATATCAAAATTTTGCAGGAACTTTCATTCGAAATAAAGGTCTCTCATGTGGGTGTTCTTAATGTTTCAGAATTAATAATACGCATCTGGTTTATTATATATATATATATGTTTATG

Network for GWHGAAEX008550

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module9

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.650
SRP064423	SRR2545915	Juvenile tuber	1.620
SRP108465	SRR5643513	five period of Gastrodia elata	0.560
	SRR5643514	five period of Gastrodia elata	0.930
	SRR5643515	five period of Gastrodia elata	1.000
	SRR5643524	five period of Gastrodia elata	0.780
	SRR5643525	five period of Gastrodia elata	0.580
	SRR5643528	five period of Gastrodia elata	0.570
	SRR5643658	five period of Gastrodia elata	0.440
	SRR5643659	five period of Gastrodia elata	0.680
	SRR5643660	five period of Gastrodia elata	0.820
	SRR5643661	five period of Gastrodia elata	0.670
	SRR5643662	five period of Gastrodia elata	0.810
	SRR5643663	five period of Gastrodia elata	0.880
	SRR5643664	five period of Gastrodia elata	0.500
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.930
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.150
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.670
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.280
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.050
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.760
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.760
SRP279888	Gastro	Gastrodia elata tuber	2.41
	Juven	Juvenile tuber	0.88
	Mother_Gastro	Mother tuber of Gastrodia elata	1.51
	Mother_Juven	Mother tuber of Juvenile	0.78