Detail information of GWHGAAEX008553/evm.TU.scaffold_221.11_evm.TU.scaffold_221.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG44747.00E-68Uncharacterized conserved protein
nrgi|743838266|ref|XP_010936650.1|2.68E-106PREDICTED: transmembrane protein 136-like [Elaeis guineensis]
trEMBLtr|M1B8X6|M1B8X6_SOLTU5.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400039887}
TAIRAT1G351707.00E-68TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000219639628826806+
Transcript Sequence

Network for GWHGAAEX008553

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03798.15TRAM_LAG1_CLN8342117.60E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.800
SRR2545915Juvenile tuber13.870
SRP108465SRR5643513five period of Gastrodia elata6.010
SRR5643514five period of Gastrodia elata26.470
SRR5643515five period of Gastrodia elata8.930
SRR5643524five period of Gastrodia elata24.470
SRR5643525five period of Gastrodia elata61.240
SRR5643528five period of Gastrodia elata51.570
SRR5643658five period of Gastrodia elata69.290
SRR5643659five period of Gastrodia elata11.360
SRR5643660five period of Gastrodia elata12.060
SRR5643661five period of Gastrodia elata10.610
SRR5643662five period of Gastrodia elata22.520
SRR5643663five period of Gastrodia elata22.540
SRR5643664five period of Gastrodia elata26.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.290
SRR6049655Rhizomagastrodiae_C368-T10_good_113.300
SRR6049656Rhizomagastrodiae_C368-T07_good_19.970
SRR6049657Rhizomagastrodiae_C368-T07_good_110.870
SRR6049658Rhizomagastrodiae_C368-T04_good_18.620
SRR6049659Rhizomagastrodiae_C368-T04_good_18.640
SRR6049660Rhizomagastrodiae_C368-T01_good_111.930
SRR6049661Rhizomagastrodiae_C368-T04_good_17.850
SRR6049662Rhizomagastrodiae_C368-T01_good_123.550
SRR6049663Rhizomagastrodiae_C368-T01_good_122.330
SRR6049664Rhizomagastrodiae_C368-T10_good_15.250
SRR6049665Rhizomagastrodiae_C368-T10_good_15.250
SRP279888GastroGastrodia elata tuber 16.87
JuvenJuvenile tuber10.76
Mother_GastroMother tuber of Gastrodia elata 25.46
Mother_JuvenMother tuber of Juvenile 15.93